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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:36:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arvicola amphibius genome assembly, chromosome: 4.
LR862383.1:106169662-106169681
GAACCTTTTCCCCTTCTGTGATTTGGCTCC106169662TGGTTCCTTTCCTTCCTTCAGTGGCAGCTCAGATGTCATCCTTCCCAGAA
Lutra lutra genome assembly, chromosome: 6.
LR738408.1:20082842-20082861
CAAGGCAAACATGCAGAAATCAGTCACTCT20082842TGGTTCCTTTCCTTCCTTCACAACTTCGCTCTCTCTCTTCGAAGGAGATA
Delphinus delphis genome assembly, chromosome: 1.
OX465326.1:114364670-114364689
GCAAGCCATTACTTCAGTGAGAAACATCCT114364670TGGTTCCTTTCCTTCCTTCATCATTCACATCTAAATCATCAAAATATCTG
Stenella coeruleoalba genome assembly, chromosome: 1.
OX596385.1:114375858-114375877
GCAAGCCATTACTTCAGTGAGAAACATCCT114375858TGGTTCCTTTCCTTCCTTCATCATTCACATCTAAATCATCAAAATATCTG
Furcifer pardalis isolate Fpa_1 chromosome 2.
CP126891.1:119301973-119301992
CATATCACATACCAAGCCCTTTCCCCCTTG119301973TGGTTCCTTTCCTTCCTTCATGTTTTGTCAAGCTCTAAACATTTTCCATC
TFL_11_B01_E001.g1 USDA-Tifton Peanut Library TFL Arachis hypogaea cDNA clone TFL-011-2_B01 5', mRNA sequence.
ES767200.1:423-442
TGAACTGATTTCAGAGTTCCATCCCCATCA423TGGTTCCTTTCCTTCCTTCATTGTCCCCTTCCCCCCTCACACAAACACAT
TSA: Arachis hypogaea CL20002Contig1.Arhy mRNA sequence.
EZ739811.1:423-442
TGAACTGATTTCAGAGTTCCATCCCCATCA423TGGTTCCTTTCCTTCCTTCATTGTCCCCTTCCCCCCTCACACAAACACAT
TSA: Arachis hypogaea Ahy.Unigene5441 mRNA sequence.
JR546005.1:173-192
TGAACTGATTTCAGAGTTCCATCCCCATCA173TGGTTCCTTTCCTTCCTTCATTGTCCCCTTCCCCCCTCACACAAACACAT
Arachis hypogaea DNA, clone: AHGS47I01.
DH961700.1:36-55
TGAACTGATTTCAGGGTTTCATCCCCATCA36TGGTTCCTTTCCTTCCTTCATTGTCTCCTCCCCCCCACACAAACACACAC
Arachis hypogaea DNA, clone: AHGS40H01.
DH961845.1:363-382
TGAACTGATTTCAGAGTTCCATCCCTATCA363TGGTTCCTTTCCTTCCTTCATTCCCCCCCCCCCACACACACACACACACA
Arachis hypogaea DNA, clone: KIAC10O15.
DH964952.1:235-254
TGAACTGATTTCAGAGTTCCATCCCCATCA235TGGTTCCTTTCCTTCCTTCATTGTCCCCTTCCCCCTCACACAACACACAC
Arachis hypogaea DNA, clone: KIAC10B14.
DH965519.1:396-415
TGAACTGATTTCAGAGTTCCATCCCCATCA396TGGTTCCTTTCCTTCCTTCATTGTGCCCTTCCCCCCTTCACACAAGCGCA
Arachis hypogaea cultivar Shitouqi chromosome B01.
CP030993.1:45987369-45987388
TGAACTGATTTCAGAGTTCCATCCCCATCA45987369TGGTTCCTTTCCTTCCTTCATTGTGCCCTTCCCCCCTTCACACAAGCGCA
Arachis hypogaea cultivar Shitouqi chromosome B02.
CP030994.1:96503331-96503350
TGAACTGATTTCAGAGTTCCATCCCTATCA96503331TGGTTCCTTTCCTTCCTTCATTCCCCCCCCCCACACACACACACACACGA
Arachis hypogaea cultivar Shitouqi chromosome B04.
CP030996.1:130793915-130793934
TGAACTGATTTCAGAGTTCCATCCCCATCA130793915TGGTTCCTTTCCTTCCTTCATTGTCCCCTTCCCCCCTCACACAAACACAT
Arachis ipaensis cultivar K30076 chromosome 01.
CP049892.1:46767158-46767177
TGAACTGATTTCAGAGTTCCATCCCCATCA46767158TGGTTCCTTTCCTTCCTTCATTGTGCCCTTCCCCCCTTCACACAAGCGCA
Arachis ipaensis cultivar K30076 chromosome 02.
CP049893.1:95769361-95769380
TGAACTGATTTCAGAGTTCCATCCCTATCA95769361TGGTTCCTTTCCTTCCTTCATTCCCCCCCCCCCCACACACACACACACAC
XXX.
LR721787.1:13825562-13825581
CGGTATAACCTTCATTCTTTCTTTTTTTAA13825562TGGTTCCTTTCCTTCCTTCATAAAATAGGACTGGCACTTGCATAGTTAAG
Triticum aestivum genome assembly, chromosome: 4B.
LR862518.1:494897506-494897525
CCTATGTGCGCACATCACGCTGCATCGGTG494897506TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Triticum aestivum genome assembly, chromosome: 4B.
LR862539.1:487998064-487998083
CCTATGTGCGCACATCACGCTGCATCGGTG487998064TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Triticum aestivum genome assembly, chromosome: 4B.
LR862560.1:496591999-496592018
CCTATGTGCGCACATCACGCTGCATCGGTG496591999TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Triticum aestivum genome assembly, chromosome: 4B.
LR865468.1:493334717-493334736
CCTATGTGCGCACATCACGCTGCATCGGTG493334717TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Triticum aestivum genome assembly, chromosome: 4B.
LR865489.1:490040675-490040694
CCTATGTGCGCACATCACGCTGCATCGGTG490040675TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Triticum aestivum genome assembly, chromosome: 4B.
LR865510.1:488927664-488927683
CCTATGTGCGCACATCACGCTGCATCGGTG488927664TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Triticum aestivum genome assembly, chromosome: 4B.
LR865749.1:514750452-514750471
CCTATGTGCGCACATCACGCTGCATCGGTG514750452TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Triticum aestivum genome assembly, chromosome: 4B.
LR865770.1:488081085-488081104
CCTATGTGCGCACATCACGCTGCATCGGTG488081085TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Triticum aestivum genome assembly, chromosome: 4B.
LR877319.1:507831565-507831584
CCTATGTGCGCACATCACGCTGCATCGGTG507831565TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Triticum aestivum genome assembly, chromosome: 4B.
LR878445.1:492435641-492435660
CCTATGTGCGCACATCACGCTGCATCGGTG492435641TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Triticum aestivum genome assembly, chromosome: 4B.
LS992090.1:495026143-495026162
CCTATGTGCGCACATCACGCTGCATCGGTG495026143TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Triticum turgidum subsp. durum genome assembly, chromosome: 4B.
LT934118.1:499054752-499054771
CCTATGTGCGCACATCACGCTGCATCGGTG499054752TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Glycyrrhiza inflata isolate NCNPR21962d FLORICAULA/LEAFY (LFY) gene, intron 2 and partial cds.
MT362025.1:105-124
AAACCAGTGTCAGGGTTGTGTAGTGGATAG105TGGTTCCTTTCCTTCCTTCAGGATCACGAACCGTTTGGATAATATTGTGT
Triticum aestivum genome assembly, chromosome: 4B.
OU015731.1:508951504-508951523
CCTATGTGCGCACATCACGCTGCATCGGTG508951504TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Triticum aestivum genome assembly, chromosome: 4B.
OU343179.1:515676506-515676525
CCTATGTGCGCACATCACGCTGCATCGGTG515676506TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Triticum aestivum genome assembly, chromosome: 4B.
OU963882.1:501399324-501399343
CCTATGTGCGCACATCACGCTGCATCGGTG501399324TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Triticum aestivum genome assembly, chromosome: 4B.
OV100747.1:495102489-495102508
CCTATGTGCGCACATCACGCTGCATCGGTG495102489TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Triticum aestivum genome assembly, chromosome: 4B.
OW530320.1:495102489-495102508
CCTATGTGCGCACATCACGCTGCATCGGTG495102489TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Triticum aestivum genome assembly, chromosome: 4B.
OX637235.1:431276388-431276407
CCTATGTGCGCACATCACGCTGCATCGGTG431276388TGGTTCCTTTCCTTCCTTCACCTGCTCCTTCCAGCAGCTATTCTACCACT
Apamea anceps genome assembly, chromosome: Z.
OX637500.1:17005274-17005293
AATTTTAATCGTGAAGGAAAGGAACCGCTC17005274TGGTTCCTTTCCTTCCTTCACGATTAAAATGAAAAAGAGCAAGATACCTA
Eilema griseolum genome assembly, chromosome: 6.
OY759235.1:5449581-5449600
TCAATCAATTAGCCTATTTCAATCCACTGT5449581TGGTTCCTTTCCTTCCTTCATTTTTCTTTTTACTTTATCTGGAGCTAAAT
Phaonia tiefii genome assembly, chromosome: 1.
OZ008367.1:331572044-331572063
TATGTCCAATAATCACTTTGTTCCTAAGTA331572044TGGTTCCTTTCCTTCCTTCATTGGAAATATAACAATAATTTACCCAGTCC
Acomys kempi genome assembly, chromosome: 11.
OU015365.1:518967-518986
CTCTGGGAAGGATGACATCTGAGCCGCTGG518967TGAAGGAAGGAAAGGAACCAGAGCTGAGCACAGGAGGAGAAAGGTTGGAA
Acomys dimidiatus genome assembly, chromosome: 12.
OU015385.1:1335196-1335215
CTCTGGGAAGGATGACATCTGAGCCGCTGG1335196TGAAGGAAGGAAAGGAACCAGAGCTGAGCACAGGAGGAGAAAGGTTGGAG
Acomys dimidiatus genome assembly, chromosome: 12.
OU015385.1:7764161-7764180
CTCTGGGAAGGATGACATCTGAGCCGCTGG7764161TGAAGGAAGGAAAGGAACCAGAGCTGAGCACAGGAGGAGAAAGGTTGGAG
Acomys percivali genome assembly, chromosome: 11.
OU015752.1:476114-476133
CTCTGGGAAGGATGACATCTGAGCTGCTGG476114TGAAGGAAGGAAAGGAACCAGAGCTGAGCACAGAAGGAGAAAGGTTGGAA
Apodemus sylvaticus genome assembly, chromosome: 18.
OX359315.1:65279633-65279652
ATGCCTTTCCTTGTAAGAGGGAAGACAGGA65279633TGAAGGAAGGAAAGGAACCAGGGCTGTTCTAGTCATTCAGGGCTTGTGGA
Chionomys nivalis genome assembly, chromosome: 17.
OX465465.1:15917507-15917526
TTCTGCATCTTAAAATGTGCACATTCAATC15917507TGAAGGAAGGAAAGGAACCAGAGAGGGAAACAACTGACATGGAAGAAGCC
Meles meles genome assembly, chromosome: 5.
OV277445.1:134294860-134294879
TATCTCCTTTGAAGAGAGAGAGTGAAGGTG134294860TGAAGGAAGGAAAGGAACCAAGAGTGACTGATTTCTGCATGTTTTGAGCT
Arachis hypogaea DNA, clone: KIAC06M09.
DH965144.1:617-636
GTGTGTGTTGTGTGAGGGGGAAGGGGACAA617TGAAGGAAGGAAAGGAACCATGATGGGGATGGAACTCTGAAATCAGTTCA
Arachis hypogaea cultivar Shitouqi chromosome A09.
CP030991.1:59578256-59578275
GTATGTGTATGTGAGGGTGAAGGGGGTCAA59578256TGAAGGAAGGAAAGGAACCATGATGTAGATGGTACTCTGAAAACAGTTCA
Arachis hypogaea cultivar Shitouqi chromosome A10.
CP030992.1:20870072-20870091
GTGTGTGTTTGTGTGGGGGGGAGGAGACAA20870072TGAAGGAAGGAAAGGAACCATGATGGGGATGAAACCCTGAAATCAGTTCA
Arachis hypogaea cultivar Shitouqi chromosome B06.
CP030998.1:94571894-94571913
GTGTGTGTTGTGTGAGGGGGAAGGGGACAA94571894TGAAGGAAGGAAAGGAACCATGATGGGGATGGAACTCTGAAATCAGTTCA
Arachis ipaensis cultivar K30076 chromosome 04.
CP049895.1:142311759-142311778
ATGTGTTTGTGTGAGGGGGGAAGGGGACAA142311759TGAAGGAAGGAAAGGAACCATGATGGGGATGGAACTCTGAAATCAGTTCA
Arachis ipaensis cultivar K30076 chromosome 06.
CP049897.1:93928360-93928379
GTGTGTGTTGTGTGAGGGGGAAGGGGACAA93928360TGAAGGAAGGAAAGGAACCATGATGGGGATGGAACTCTGAAATCAGTTCA
Microcos paniculata chromosome 1b.
CP131447.1:2519403-2519422
TAGGCAATGCATAATCGGTGTGATGAAGGG2519403TGAAGGAAGGAAAGGAACCAAGGAGGAGAATCTTCAAAAGGGCCATAGGC
Microcos paniculata chromosome 1a.
CP131456.1:2593664-2593683
TAGGCAATGCATAATCGGTGTGATGAAGGG2593664TGAAGGAAGGAAAGGAACCAAGGAGGAGAATCTTCAAAAGGGCCATAGGC
Acanthosoma haemorrhoidale genome assembly, chromosome: 1.
OV884011.1:140022084-140022103
GCTTTATTAAGCTGCAGGATTGTTGATGAT140022084TGAAGGAAGGAAAGGAACCAGTTGTTAGCTTTTAAGATCGTGGTGAAAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGTTCCTTTCCTTCCTTCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGTTCCTTTCCTTCCTTCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.276 | 0.267 | search_plus_done; http://172.18.8.135:50400/match?q=TGGTTCCTTTCCTTCCTTCA&k=0&no_gap=0&offset=0&limit=50
0.387 | 0.110 | search_minus_done; http://172.18.8.135:50400/match?q=TGAAGGAAGGAAAGGAACCA&k=0&no_gap=0&offset=0&limit=10
0.397 | 0.010 | cgi_end;

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