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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 17:26:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arvicola amphibius genome assembly, chromosome: 5.
LR862384.1:121013096-121013115
CCATTTATTTAGTTTCATGACACTGCATCA121013096TGTGACCTGTTCCTTGACACTTTCTGGGGGCGGGGAGACTAGAAACAAAA
Oryzias latipes strain HSOK chromosome 2.
CP020622.1:8025900-8025919
ATCTCCTCTGAGAACTTTGGAGCTTTTCTC8025900TGTGACCTGTTCCTTGACACTCTGAGCTTCAGCGTTCCAGACAGCCAGCA
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:56200531-56200550
CTGGTTCCGCATTTTTGAAACAGTGGTTGG56200531TGTGACCTGTTCCTTGACACAAGAAAACCAAATATGTTCCCCATCTACAC
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:55071486-55071505
CTGGTTCCGCATTTTTGAAACAGTGGTTGG55071486TGTGACCTGTTCCTTGACACAAGAAAACCAAATATGTTCCCCATCTACAC
Echeneis naucrates genome assembly, chromosome: 9.
LR584050.1:3077035-3077054
TTTCCTTTATATTAATAATCATAATAAAAA3077035GTGTCAAGGAACAGGTCACACAGCAAAAGACTTTGGACCACAAACGTCAG
Crambe crambe genome assembly, chromosome: 5.
OZ004585.1:1108139-1108158
CCCTCAAGGACTTGGAGACTCAACTTAAGA1108139GTGTCAAGGAACAGGTCACAGTTCTCAAACCTCCAAAGGTCCCTAACTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTGACCTGTTCCTTGACAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTGACCTGTTCCTTGACAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.267 | 0.258 | search_plus_done; http://172.18.8.135:50400/match?q=TGTGACCTGTTCCTTGACAC&k=0&no_gap=0&offset=0&limit=50
0.365 | 0.098 | search_minus_done; http://172.18.8.135:50400/match?q=GTGTCAAGGAACAGGTCACA&k=0&no_gap=0&offset=0&limit=46
0.366 | 0.001 | cgi_end;

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