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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:58:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Gossypium herbaceum isolate Zhongcao1 chromosome 10.
CP106689.1:118933015-118933039
AACCTTATCAATGCATTCCTTACATACAAA118933015TGTGACCTTAAGACAGCCTAAAACCCAATGAAATCCTACATAAAACTCGAAAATT
Gossypium bickii isolate GPG1lz chromosome 10.
CP106713.1:131887671-131887695
AACCTTATCAATGCATTCCTTACATACAAA131887671TGTGACCTTAAGACAGCCTAAAACCCGATGAAATCCTACATAAACCTCGAAAATT
Gossypium rotundifolium isolate GPK201 chromosome 10.
CP106731.1:2557728-2557752
AACCTTATCAATGCATTCCTTACATACAAA2557728TGTGACCTTAAGACAGCCTAAAACCCGATGAAATCCTACATAAAACTCGAAAATT
Gossypium hirsutum chromosome 10 SNP marker NG0203671 associated with blue disease resistance genomic sequence.
GU265861.1:203-227
AACCTTATCAATGCATTCCTTACATACAAA203TGTGACCTTAAGACAGCCTAAAACCCNATGAAATCCTACACAAAACTCGAAAATT
Gossypioides kirkii chromosome KI_10.
CP032252.1:555143-555167
AATTTTCGAGTTTTATGTAGGATTTCATCT555143GGTTTTAGGCTGTCTTAAGGTCACATTTGTTTGTAAGGAATGCATTGATAAGGTT
Gossypium raimondii isolate D5-4 chromosome D5_10.
CP032562.1:697961-697985
AATTTTCAAGTTTTATGTAGAATTTCATCG697961GGTTTTAGGCTGTCTTAAGGTCACATTTGTATGTAAGGAATGCATTGATAAGGTT
Gossypium turneri isolate D10-2 chromosome D10_10.
CP032580.1:731271-731295
AATTTTCAAGTTTTATGTAGGATTTCATCG731271GGTTTTAGGCTGTCTTAAGGTCACATTTGTATGTAAGGAATGCATTGATAAGGTT
Gossypium herbaceum isolate GPA1alz chromosome 10.
CP106701.1:845982-846006
AATTTTCGAGTTTTATGTAGGATTTCATTG845982GGTTTTAGGCTGTCTTAAGGTCACATTTGTATGTAAGGAATGCATTGATAAGGTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTGACCTTAAGACAGCCTAAAACC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTGACCTTAAGACAGCCTAAAACC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.274 | 0.266 | search_plus_done; http://172.18.8.135:50400/match?q=TGTGACCTTAAGACAGCCTAAAACC&k=0&no_gap=0&offset=0&limit=50
0.366 | 0.092 | search_minus_done; http://172.18.8.135:50400/match?q=GGTTTTAGGCTGTCTTAAGGTCACA&k=0&no_gap=0&offset=0&limit=46
0.369 | 0.003 | cgi_end;

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