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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 14:35:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Sequence 1035 from Patent EP2519097.
JB348623.1:276-295
CTGTTGAAGCCTTAAAAGATCAAGTTGGTT276TGTGCAGATGGAATTACCCATTAAGGTGTGTGGCACAACACACAAAGAAT
Sequence 1037 from Patent EP2519097.
JB348625.1:122-141
CAGTTGAAGCCTTAAAAGATCAAGTTGGTT122TGTGCAGATGGAATTACCCATTAAGGTGTGTGGCACAACACACAAAGAAT
Sequence 1035 from patent US 9493785.
KH360535.1:276-295
CTGTTGAAGCCTTAAAAGATCAAGTTGGTT276TGTGCAGATGGAATTACCCATTAAGGTGTGTGGCACAACACACAAAGAAT
Sequence 1037 from patent US 9493785.
KH360537.1:122-141
CAGTTGAAGCCTTAAAAGATCAAGTTGGTT122TGTGCAGATGGAATTACCCATTAAGGTGTGTGGCACAACACACAAAGAAT
Sequence 1035 from Patent EP3056569.
LQ604184.1:276-295
CTGTTGAAGCCTTAAAAGATCAAGTTGGTT276TGTGCAGATGGAATTACCCATTAAGGTGTGTGGCACAACACACAAAGAAT
Sequence 1037 from Patent EP3056569.
LQ604186.1:122-141
CAGTTGAAGCCTTAAAAGATCAAGTTGGTT122TGTGCAGATGGAATTACCCATTAAGGTGTGTGGCACAACACACAAAGAAT
Sequence 1035 from patent US 10351873.
MO205757.1:276-295
CTGTTGAAGCCTTAAAAGATCAAGTTGGTT276TGTGCAGATGGAATTACCCATTAAGGTGTGTGGCACAACACACAAAGAAT
Sequence 1037 from patent US 10351873.
MO205759.1:122-141
CAGTTGAAGCCTTAAAAGATCAAGTTGGTT122TGTGCAGATGGAATTACCCATTAAGGTGTGTGGCACAACACACAAAGAAT
KS12042C07 KS12 Capsicum annuum cDNA, mRNA sequence.
CA524720.1:122-141
CAGTTGAAGCCTTAAAAGATCAAGTTGGTT122TGTGCAGATGGAATTACCCATTAAGGTGTGTGGCACAACACACAAAGAAT
KS26038H03 KS26 Capsicum annuum cDNA, mRNA sequence.
GD133198.1:148-167
CTGTTGAAGCCTTAAAAGATCAAGTTGGTT148TGTGCAGATGGAATTACCCATTAAGGTGTGTGGCACAACACACAAAGAAT
TSA: Capsicum annuum MGMT_Contig39986 mRNA sequence.
JW090230.1:328-347
CTGTTGAAGCCTTAAAAGATCAAGTTGGTT328TGTGCAGATGGAATTACCCATTGAGGTCTTTGGCACAACACACAAAGAAT
TSA: Capsicum annuum CM334_CLC_10698, mRNA sequence.
JW113352.1:170-189
CTGTTGAAGCCTTAAAAGATCAAGTTGGTT170TGTGCAGATGGAATTACCCATTAAGGTGTGTGGCACAACACACAAAGAAT
Capsicum annuum Takanotsume DNA, chromosome 7, sequence.
AP026702.1:234473597-234473616
CAGTTGAAGCCTTAAAAGATCAAGTTGGTT234473597TGTGCAGATGGAATTACCCATTAAGGTGTGTGGCACAACACACAAAGAAT
Capsicum annuum Takanotsume DNA, chromosome 7, sequence.
AP026702.1:234488780-234488799
CTGTTGAAGCCTTAAAAGATCAAGTTGGTT234488780TGTGCAGATGGAATTACCCATTAAGGTGTGTGGCACAACACACAAAGAAT
Capsicum annuum Takanotsume DNA, chromosome 7, sequence.
AP026702.1:234498794-234498813
CTGTTGAAGCCTTAAAAGATCAAGTTGGTT234498794TGTGCAGATGGAATTACCCATTGAGGTCTTTGGCACAACACACAAAGAAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 7.
CP124725.1:237510582-237510601
CAGTTGAAGCCTTAAAAGATCAAGTTGGTT237510582TGTGCAGATGGAATTACCCATTAAGGTGTGTGGCACAACACACAAAGAAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 7.
CP124725.1:237525754-237525773
CTGTTGAAGCCTTAAAAGATCAAGTTGGTT237525754TGTGCAGATGGAATTACCCATTAAGGTGTGTGGCACAACACACAAAGAAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 7.
CP124725.1:237535716-237535735
CTGTTGAAGCCTTAAAAGATCAAGTTGGTT237535716TGTGCAGATGGAATTACCCATTGAGGTCTTTGGCACAACACACAAAGAAT
L.esculentum pT52 mRNA for wound-induced gene, partial cds.
X59882.1:58-77
CAGTAGAGGCCTTAAAAGATCAAGTTGGAT58TGTGCAGATGGAATTACCCATTGAGGTCTTTGGCACAACACACAAAGAAT
KS23011E08 KS23 Capsicum annuum cDNA, mRNA sequence.
GD112009.1:350-369
ATTCTTTGTGTGTTGTGCCACACACCTTAA350TGGGTAATTCCATCTGCACAAACCAACTTGATCTTTTAAGGCTTCAACAG
TSA: Capsicum annuum EJ_MegaContig_25639, mRNA sequence.
JW134213.1:340-359
ATTCTTTGTGTGTTGTGCCACACACCTTAA340TGGGTAATTCCATCTGCACAAACCAACTTGATCTTTTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTGCAGATGGAATTACCCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTGCAGATGGAATTACCCA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.643 | 0.634 | search_plus_done; http://172.18.8.135:50400/match?q=TGTGCAGATGGAATTACCCA&k=0&no_gap=0&offset=0&limit=50
0.853 | 0.210 | search_minus_done; http://172.18.8.135:50400/match?q=TGGGTAATTCCATCTGCACA&k=0&no_gap=0&offset=0&limit=31
0.854 | 0.001 | cgi_end;

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