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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:53:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys kempi genome assembly, chromosome: 13.
OU015367.1:70894656-70894675
GCCAGATCACCAGGGATCACATGGGCCACT70894656TGTTGCATCAGCTGGTACAGTCAGAAAAACTCAGCAAGCAGGACTTCTTC
Heterocephalus glaber genome assembly, chromosome: 8.
OX090916.1:87647530-87647549
GAGTTCAGCAGAGGCAGCTTTTCTCTGCCC87647530TGTTGCATCAGCTGGTACAGTCCAAAGCCCAGCTCCACTAGCCTCTCAGA
Heterocephalus glaber genome assembly, chromosome: 8.
OX090948.1:80418232-80418251
GAGTTCAGCAGAGGCAGCTTTTCTCTGCCC80418232TGTTGCATCAGCTGGTACAGTCCAAAGCCCAGCTCCACTAGCCTCTCAGA
Heterocephalus glaber genome assembly, chromosome: 6.
OZ001071.1:60886436-60886455
GAGTTCAGCAGAGGCAGCTTTTCTCTGCCC60886436TGTTGCATCAGCTGGTACAGTCCAAAGCCCAGCTCCACTAGCCTCTCAGA
Heterocephalus glaber genome assembly, chromosome: 6.
OZ001114.1:60262101-60262120
GAGTTCAGCAGAGGCAGCTTTTCTCTGCCC60262101TGTTGCATCAGCTGGTACAGTCCAAAGCCCAGCTCCACTAGCCTCTCAGA
UCRCS08_39D03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-39D03-H5-1-5.b, mRNA sequence.
CX074432.1:644-663
AGATCCCATTGATGTCCGAACGTTGGGATT644TGTTGCATCAGCTGGTACAGGCAACTCGATTTCAACATTTGTTGCGGTGC
UCRCS10_14F11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14F11-K22-6.b, mRNA sequence.
CX672058.1:712-731
AGATCCCATTGATGTCCGAACGTTGGGATT712TGTTGCATCAGCTGGTACAGGCAACTCGATTTCAACATTTGTTGCGGTGC
CP45_H06_057.f1 Citrus paradisi young grapefruit leaf cDNA library Citrus x paradisi cDNA clone CP45_H06_057 3', mRNA sequence.
EB687210.1:634-653
AGATCCCATTGATGTCCGAACGTTGGGATT634TGTTGCATCAGCTGGTACAGGCAACTCGATTTCACAT
Populus trichocarpa clone Pop1-41G18, complete sequence.
AC149575.1:138-157
GATCACTCTAACAGCAGCAACAATGGCTGG138TGTTGCATCAGCTGGTACAGTTGGAGCACCTCTTTTGGCTTTGAAGTTAT
Populus trichocarpa clone ACSB2333-H21, complete sequence.
AC213917.1:12968-12987
GATCACTCTAACGGCAGCAACAATGGCTGG12968TGTTGCATCAGCTGGTACAGTTGGAGCACCTCTTTTGGCTTTGAAGTTAT
Populus trichocarpa clone ACSB2333-H21, complete sequence.
AC213917.1:32054-32073
GATCACTCTAACAGCAGCAACAATGGCTGG32054TGTTGCATCAGCTGGTACAGTTGGAGCACCTCTTTTGGCTTTGAAGTTAT
Acomys dimidiatus genome assembly, chromosome: 13.
OU015386.1:40459529-40459548
GAAGAAGTCCTGCTTGCTGAGTTTTTCTGA40459529CTGTACCAGCTGATGCAACAAGTGGCCCATGTGATCCCTGGTGATCTGGC
UCRPT02_43D05_g Poncirus trifoliata Roots with Iron Deficiency - UCRPT02-UCR1 Citrus trifoliata cDNA clone UCRPT02-43D05-G10-1-5.g, mRNA sequence.
CX639811.1:275-294
GCACTGCAACAAATGTTGAAATCGAGTTAC275CTGTACCAGCTGATGCAACAAATCCCACCGTTCGGACATCAATGGGATCT
Populus nigra genome assembly, chromosome: 7.
OX637678.1:21870045-21870064
ATAACTTCAAAGCCAAAAGAGGTGCTCCAA21870045CTGTACCAGCTGATGCAACACCAGCCATTGTTGCTGCTGTTAGAGTGATC
Populus nigra genome assembly, chromosome: 7.
OX637678.1:21891868-21891887
ATAACTTCAAAGCCAAAAGAGGTGCTCCAA21891868CTGTACCAGCTGATGCAACACCAGCCATTGTTGCTGCTGTTAGAGTGATC
Citrus sinensis genome assembly, chromosome: 1.
OY754318.1:14467973-14467992
GCACTGCAACAAATGTTGAAATCGAGTTGC14467973CTGTACCAGCTGATGCAACAAATCCCAACGTTCGGACATCAATGGGATCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTTGCATCAGCTGGTACAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTTGCATCAGCTGGTACAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.268 | 0.259 | search_plus_done; http://172.18.8.135:50400/match?q=TGTTGCATCAGCTGGTACAG&k=0&no_gap=0&offset=0&limit=50
0.404 | 0.136 | search_minus_done; http://172.18.8.135:50400/match?q=CTGTACCAGCTGATGCAACA&k=0&no_gap=0&offset=0&limit=39
0.407 | 0.004 | cgi_end;

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