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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 19:29:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:6822331-6822355
ATACAAAACTTTGTTTGTTTAGTCATTGTA6822331TGTTTTGATCTTTACTGTTTTTGGAACAATCTAATAATACATTTTTATTTAATTT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB034A02, complete sequence.
AC189308.2:73850-73874
AAATTAAATAAAAATGTATTATTAGATTGT73850TCCAAAAACAGTAAAGATCAAAACATACAATGACTAAACAAACAAAGTTTTGTAT
Brassica napus genome assembly, chromosome: A07.
HG994361.1:22714339-22714363
AAATTAAATAAAAATGTATTATTAGATTGT22714339TCCAAAAACAGTAAAGATCAAAACATACAATGACTAAACAAACAAAGTTTTGTAT
Brassica rapa genome, scaffold: A07.
LR031574.1:21608099-21608123
AAATTAAATAAAAATGTATTATTAGATTGT21608099TCCAAAAACAGTAAAGATCAAAACATACAATGACTAAACAAACAAAGTTTTGTAT
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:21899360-21899384
AAATTAAATAAAAATGTATTATTAGATTGT21899360TCCAAAAACAGTAAAGATCAAAACATACAATGACTAAACAAACAAAGTTTTGTAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTTTTGATCTTTACTGTTTTTGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTTTTGATCTTTACTGTTTTTGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.370 | 0.362 | search_plus_done; http://172.18.8.135:50400/match?q=TGTTTTGATCTTTACTGTTTTTGGA&k=0&no_gap=0&offset=0&limit=50
0.478 | 0.107 | search_minus_done; http://172.18.8.135:50400/match?q=TCCAAAAACAGTAAAGATCAAAACA&k=0&no_gap=0&offset=0&limit=49
0.480 | 0.003 | cgi_end;

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