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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 11:25:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Sequence 78 from Patent WO2006013072.
CS401581.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 79 from Patent WO2006013072.
CS401582.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 5 from Patent WO2006089911.
CS409888.1:167-185
AATTATATTCCATCTTTAATTTGGCCCTTT167TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 78 from Patent EP2163635.
HC471042.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 79 from Patent EP2163635.
HC471043.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 78 from Patent EP2166103.
HC476902.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 79 from Patent EP2166103.
HC476903.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 78 from Patent EP2166104.
HC477707.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 79 from Patent EP2166104.
HC477708.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 78 from patent US 8465915.
HJ230574.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 79 from patent US 8465915.
HJ230575.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 78 from patent US 9133466.
HL197148.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 79 from patent US 9133466.
HL197149.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Cyclobacterium marinum DSM 745, complete genome.
CP002955.1:1299179-1299197
TTTATGGCAAAATCATTCATCTTACCTGTA1299179TTATTATTCGCTATGGCCCGAACATTGATATTATCAATAGGGGCCGGAT
Cheilosia vulpina genome assembly, chromosome: 5.
OU744280.1:52862520-52862538
ACTATATAGCACATTTTATATATTTATTCG52862520TTATTATTCGCTATGGCCCTGTATTCGGTTCTTGAGAGTCTTTACAGAC
Astatotilapia calliptera genome assembly, chromosome: 4.
LS420022.2:6302188-6302206
GTCACTGAAGCAGAGGAACAGATTTGTCTT6302188GGGCCATAGCGAATAATAAATTCCCTCATATCCGATTGGCACTTTCTTT
Neolamprologus multifasciatus genome assembly, chromosome: 4.
OY755035.1:6931960-6931978
GTCACTGAAGCAGAGGAACAGATTTGTCTT6931960GGGCCATAGCGAATAATAAATTCCCTCATATCCGATTGGCACTTTCTTT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH108D17, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC241177.1:64455-64473
TATAATCGTATAAATTGGGCCTGAAATGTT64455GGGCCATAGCGAATAATAAAAAGGGCTTTTGAGGACAAATTAAAGATGG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB045I17, complete sequence.
AC189362.2:42592-42610
TATAATCGTATAAATTGGGCCTGAAATGTT42592GGGCCATAGCGAATAATAAAAAGGGCTTTTGAGGACAAATTAAAGATGG
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:77498-77516
TATAATCGTATAAATTGGGCCTGAAATGTT77498GGGCCATAGCGAATAATAAAAAGGGCCAAATAAAAGATGGAATATAATT
Brassica napus genome assembly, chromosome: A03.
HG994357.1:72344-72362
TATAATCGTATAAATTGGGCCTGAAATGTT72344GGGCCATAGCGAATAATAAAAAGGGCCAAATAAAAGATGGAATATAATT
Brassica rapa genome, scaffold: A03.
LR031572.1:93375-93393
TATAATCGTATAAATTGGGCCTGAAATGTT93375GGGCCATAGCGAATAATAAAAAGGGCTTTTGGAGGACAAATAAAAGATG
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:93394-93412
TATAATCGTATAAATTGGGCCTGAAATGTT93394GGGCCATAGCGAATAATAAAAAGGGCTTTTGGAGGACAAATAAAAGATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTATTATTCGCTATGGCCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTATTATTCGCTATGGCCC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.488 | 0.479 | search_plus_done; http://172.18.8.135:50400/match?q=TTATTATTCGCTATGGCCC&k=0&no_gap=0&offset=0&limit=50
0.610 | 0.122 | search_minus_done; http://172.18.8.135:50400/match?q=GGGCCATAGCGAATAATAA&k=0&no_gap=0&offset=0&limit=35
0.615 | 0.005 | cgi_end;

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