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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-02-24 15:38:20, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 78 from Patent WO2006013072.
CS401581.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 79 from Patent WO2006013072.
CS401582.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 5 from Patent WO2006089911.
CS409888.1:167-185
AATTATATTCCATCTTTAATTTGGCCCTTT167TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 78 from Patent EP2163635.
HC471042.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 79 from Patent EP2163635.
HC471043.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 78 from Patent EP2166103.
HC476902.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 79 from Patent EP2166103.
HC476903.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 78 from Patent EP2166104.
HC477707.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 79 from Patent EP2166104.
HC477708.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 78 from patent US 8465915.
HJ230574.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 79 from patent US 8465915.
HJ230575.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 78 from patent US 9133466.
HL197148.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Sequence 79 from patent US 9133466.
HL197149.1:227-245
AATTATATTCCATCTTTAATTTGGCCCTTT227TTATTATTCGCTATGGCCCAACATTTCAGGCCCAATTTATACGATTATA
Cyclobacterium marinum DSM 745, complete genome.
CP002955.1:1299179-1299197
TTTATGGCAAAATCATTCATCTTACCTGTA1299179TTATTATTCGCTATGGCCCGAACATTGATATTATCAATAGGGGCCGGAT
Sphingobacterium detergens strain MGMM185 chromosome, complete genome.
CP182813.1:5449545-5449563
TAAGGTGATGCATTATCCGTGGCTGTTAGT5449545TTATTATTCGCTATGGCCCGGTCAACCTTGAACTAAGGGATAGACAGGT
Cheilosia vulpina genome assembly, chromosome: 5.
OU744280.1:52862520-52862538
ACTATATAGCACATTTTATATATTTATTCG52862520TTATTATTCGCTATGGCCCTGTATTCGGTTCTTGAGAGTCTTTACAGAC
Styela plicata genome assembly, chromosome: 2.
OZ023139.1:25192924-25192942
ATATGAGTATATAATATACGTTTTTTTAAC25192924TTATTATTCGCTATGGCCCGTGAACTTACCGGGGAGGGGGGGGGGATAT
Macrothele cretica genome assembly, chromosome: 10.
OZ207529.1:53534161-53534179
AATCAAATGACTTACATTCTGATTGTACCT53534161TTATTATTCGCTATGGCCCTTCATCCACATCACAAGCACTTTGTCCAAC
Macaca fascicularis isolate 582-1 chromosome 12.
CP141350.1:22530502-22530520
TAGGCATGAGCTGTCCGGAGCTGCATGCCC22530502GGGCCATAGCGAATAATAATTAAAGATTAAACGCCTGAGCTATATTCAT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH108D17, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC241177.1:64455-64473
TATAATCGTATAAATTGGGCCTGAAATGTT64455GGGCCATAGCGAATAATAAAAAGGGCTTTTGAGGACAAATTAAAGATGG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB045I17, complete sequence.
AC189362.2:42592-42610
TATAATCGTATAAATTGGGCCTGAAATGTT42592GGGCCATAGCGAATAATAAAAAGGGCTTTTGAGGACAAATTAAAGATGG
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:77498-77516
TATAATCGTATAAATTGGGCCTGAAATGTT77498GGGCCATAGCGAATAATAAAAAGGGCCAAATAAAAGATGGAATATAATT
Brassica napus cultivar Xiang5A chromosome 3.
CP151898.1:77541-77559
TATAATCGTATAAATTGGGCCTGAAATGTT77541GGGCCATAGCGAATAATAAAAAGGGCCAAATAAAAGATGGAATATAATT
Brassica napus genome assembly, chromosome: A03.
HG994357.1:72344-72362
TATAATCGTATAAATTGGGCCTGAAATGTT72344GGGCCATAGCGAATAATAAAAAGGGCCAAATAAAAGATGGAATATAATT
Brassica rapa genome, scaffold: A03.
LR031572.1:93375-93393
TATAATCGTATAAATTGGGCCTGAAATGTT93375GGGCCATAGCGAATAATAAAAAGGGCTTTTGGAGGACAAATAAAAGATG
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:93394-93412
TATAATCGTATAAATTGGGCCTGAAATGTT93394GGGCCATAGCGAATAATAAAAAGGGCTTTTGGAGGACAAATAAAAGATG
Styela plicata genome assembly, chromosome: 2.
OZ023139.1:25462581-25462599
ATATATCCCCCCCCTCCCCGGTAAGTTCAC25462581GGGCCATAGCGAATAATAAGTTAAAAAAACGTATATTATATACTCATAT
Astatotilapia calliptera genome assembly, chromosome: 4.
LS420022.3:6302188-6302206
GTCACTGAAGCAGAGGAACAGATTTGTCTT6302188GGGCCATAGCGAATAATAAATTCCCTCATATCCGATTGGCACTTTCTTT
Neolamprologus multifasciatus genome assembly, chromosome: 4.
OY755035.2:6682317-6682335
GTCACTGAAGCAGAGGAACAGATTTGTCTT6682317GGGCCATAGCGAATAATAAATTCCCTCATATCCGATTGGCACTTTCTTT
Rhamphochromis sp. 'chilingali' genome assembly, chromosome: 15.
OZ017729.1:6527249-6527267
GTCACTGAAGCAGAGGAACAGATTTGTCTT6527249GGGCCATAGCGAATAATAAATCCCCTCATATCCGATTGGCACTTTCTTT
Astatotilapia calliptera genome assembly, chromosome: 4.
OZ206495.1:6260824-6260842
GTCACTGAAGCAGAGGAACAGATTTGTCTT6260824GGGCCATAGCGAATAATAAATTCCCTCATATCCGATTGGCACTTTCTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTATTATTCGCTATGGCCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTATTATTCGCTATGGCCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.335 | 0.326 | search_plus_done; http://172.18.8.135:50800/match?q=TTATTATTCGCTATGGCCC&k=0&no_gap=0&offset=0&limit=50
0.389 | 0.054 | search_minus_done; http://172.18.8.135:50800/match?q=GGGCCATAGCGAATAATAA&k=0&no_gap=0&offset=0&limit=32
0.398 | 0.009 | cgi_end;

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