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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:03:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Psittacula echo genome assembly, chromosome: 5.
OY725425.1:71785610-71785629
GCATTTATCTCCAAGAAAATCTAGGAAGGT71785610TTCACTTAAAGCCTGACCCTTTGTTATCAGTTTGACACATGCTCTATGGC
Alisma plantago-aquatica genome assembly, chromosome: 1.
OY856409.1:844349617-844349636
ACAAGTGACCCTCAGGGGAACTCGTGACTT844349617TTCACTTAAAGCCTGACCCTCTTGGAGGAGCAATTGCTCGCGGGTCAGAG
Brassica campestris fae1 gene, low erucic acid line.
Y14974.1:1362-1381
GAAAGGTAATAAAGTTTGGCAGATTGCTTT1362AGGGTCAGGCTTTAAGTGAAACAGTGCGGGC
Brassica campestris fae1 gene, high erucic acid line.
Y14975.1:1359-1378
GAAAGGTAATAAAGTTTGGCAGATTGCTTT1359AGGGTCAGGCTTTAAGTGAAACAGTGCGGGC
Brassica oleracea fae1 gene.
Y14981.1:1362-1381
GAAAGGTAATAAAGTTTGGCAGATTGCTTT1362AGGGTCAGGCTTTAAGTGAAACAGTGCGGGCGGATCCCCCGGGCTGCAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCACTTAAAGCCTGACCCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCACTTAAAGCCTGACCCT | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.183 | 0.175 | search_plus_done; http://172.18.8.135:50400/match?q=TTCACTTAAAGCCTGACCCT&k=0&no_gap=0&offset=0&limit=50
0.283 | 0.100 | search_minus_done; http://172.18.8.135:50400/match?q=AGGGTCAGGCTTTAAGTGAA&k=0&no_gap=0&offset=0&limit=48
0.285 | 0.002 | cgi_end;

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