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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:23:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

BONGD73TR BO_1.6_2_KB_tot Brassica oleracea genomic clone BONGD73, genomic survey sequence.
BZ495717.1:305-324
AACCCAATACTTTAATTTCAAACTACTCCA305TTCAGCTATACCATGCCGGTGGTTTATTCTCTCCGGCCGGTTTATTTTTT
Brassica oleracea clone BAC Bo37N21, partial sequence.
AY350710.1:42618-42637
AACCCAATACTTTAATTTCAAACTAGTCCA42618TTCAGCTATACCATGCCGGTGGTTTATTCTCTCCGGCCGGTTTATTTTTT
Nannizziopsis arthrosporioides strain CBS 118890 chromosome II.
CP098261.1:6314807-6314826
GTTCGAGCTGGAGTTTCCTAACCCAGAACC6314807TTCAGCTATACCATGCCGGTCTCGATGCGTTTCTTTGTTCTACTACTTTT
Brassica napus genome assembly, chromosome: C09.
HG994373.1:62593627-62593646
AACCCAATACTTTAATTTCAAACTACTCCA62593627TTCAGCTATACCATGCCGGTGGTTTATTCTCTCCGGCCGGTTTATTTTTT
Brassica oleracea HDEM genome, scaffold: C9.
LR031875.1:60530911-60530930
AACCCAATACTTTAATTTCAAACTACTCCA60530911TTCAGCTATACCATGCCGGTGGTTTATTCTCTCCGGCCGGTTTATTTTTT
Brassica oleracea transcription factor-like protein (T2I1_290) gene, partial cds; putative oleosin (GRP1), putative oleosin (GRP2), putative oleosin (GRP3), putative oleosin (GRP4), and putative oleos
AY028608.1:6955-6974
AAAAAATAAACCGGCCGGAGAGAATAAACC6955ACCGGCATGGTATAGCTGAATGGACTAGTTTGAAATTAAAGTATTGGGTT
Brassica napus cultivar Xiang5A chromosome 16.
CP123891.1:2886086-2886105
AAAAAATAAACCGGCCGGAGAGAATAAACC2886086ACCGGCATGGTATAGCTGAATGGAGTAGTTTGAAATTAAAGTATTGGGTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCAGCTATACCATGCCGGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCAGCTATACCATGCCGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.191 | 0.182 | search_plus_done; http://172.18.8.135:50400/match?q=TTCAGCTATACCATGCCGGT&k=0&no_gap=0&offset=0&limit=50
0.289 | 0.098 | search_minus_done; http://172.18.8.135:50400/match?q=ACCGGCATGGTATAGCTGAA&k=0&no_gap=0&offset=0&limit=45
0.290 | 0.002 | cgi_end;

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