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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:50:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Scyliorhinus canicula genome assembly, chromosome: 27.
LR744056.1:20971555-20971573
TGCTTTCAGTCCATCTCCGGCAATGGGTTC20971555TTCATCCAGAACCACAGTAATTGACCACATGATATTTCCGCACAGTTTG
Labrus mixtus genome assembly, chromosome: 12.
OY757295.1:1257149-1257167
TGACATCCTGCAGCCAATAAGGATCAAGTA1257149TTCATCCAGAACCACAGTACAACTTGAAATATGGAACAAGGATGATTTT
Sequence 20 from Patent WO2014080034.
JC528730.1:1-19
1TTCATCCAGAACCACAGTA
TSA: Sclerotinia homoeocarpa SHT_5082 mRNA sequence.
JU095121.1:697-715
AATATCTAGCATGACTTGATATTTCACATT697TTCATCCAGAACCACAGTATTCATAGGCCTGCAAGGTCGTCTAGCAACT
Salarias fasciatus genome assembly, chromosome: 18.
LR597453.1:7689326-7689344
CACTGACCTGTTGGGGGTCCGCTCCTTTTT7689326TACTGTGGTTCTGGATGAAGTCCACCAGGCCGTGCACCACGGTCTTCAC
Chanos chanos genome assembly, chromosome: 5.
LR697110.1:24186465-24186483
GAGGCGGCTGCTGCTGGTCCGTTCCCTTCT24186465TACTGTGGTTCTGGATGAAGTCCACAAGGCCGTGAACCACAGTCTTCAC
Scyliorhinus canicula genome assembly, chromosome: 16.
LR744045.1:55427796-55427814
GGGTGATGTGGGCGAGTAAACTGACTAGAG55427796TACTGTGGTTCTGGATGAAAAGGAATATAGAAAAGGCAGGAGCACTGTA
Osmerus eperlanus genome assembly, chromosome: 16.
OY830029.1:15627223-15627241
GTCCTACCTGCTGCGGGTCTGCTCCCTTCT15627223TACTGTGGTTCTGGATGAAGTCCACCAGACCATGAACCACCGTCTTCAC
TSA: Sclerotinia homoeocarpa 21620.Schocontig mRNA sequence.
JW834886.1:1131-1149
AGTTGCTAGACGACCTTGCAGGCCTATGAA1131TACTGTGGTTCTGGATGAAAATGTGAAATATCAAGTCATGCTAGATATT
Phoenix dactylifera microsatellite DNA, clone CIR085.
AJ571686.1:342-360
AAGGGATGACGGCTGCCAAACTCCAAAGTT342TACTGTGGTTCTGGATGAAAGATACGAACTGTGT
Marinobacter sp. LA51 DNA, complete genome.
AP028070.1:1504340-1504358
CAAGGGAACCCTGAACCTGGACCGGGTAAA1504340TACTGTGGTTCTGGATGAAGCAGACCGAATGCTGGACATGGGCTTCGAA
Maratus michaelseni genome assembly, chromosome: X1.
OZ007586.1:497490792-497490810
GTTCTTGTTTAAAGATTGCGCACGTCTCGT497490792TACTGTGGTTCTGGATGAAGTGCATCACGGCCGGTCATATATTCGTACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCATCCAGAACCACAGTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCATCCAGAACCACAGTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.268 | 0.259 | search_plus_done; http://172.18.8.135:50400/match?q=TTCATCCAGAACCACAGTA&k=0&no_gap=0&offset=0&limit=50
0.396 | 0.128 | search_minus_done; http://172.18.8.135:50400/match?q=TACTGTGGTTCTGGATGAA&k=0&no_gap=0&offset=0&limit=46
0.401 | 0.006 | cgi_end;

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