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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-03-05 07:33:27, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium pratense DNA, clone:RC0418r.ab1.
DE245365.1:9-28
TTCGTCCA9TTCCCAATTCATCCATAGCCAATTCAATTCCAAAATTTAGATTGTGATTT
Avena sativa genome assembly, chromosome: 7D.
OU342398.1:128468690-128468709
GGTTCTAGTTCTCTATGATCTTCATGTTTG128468690TTCCCAATTCATCCATAGCCGTGCTTTTCAAAAAGATTAATAACCCTGCA
Avena sativa genome assembly, chromosome: 21.
OV702299.1:130046974-130046993
GGTTCTAGTTCTCTATGATCTTCATGTTTG130046974TTCCCAATTCATCCATAGCCGTGCTTTTCAAAAAGATTAATAACCCTGCA
Avena sativa genome assembly, chromosome: 7D.
OX371369.1:131951799-131951818
GGTTCTAGTTCTCTATGATCTTCATGTTTG131951799TTCCCAATTCATCCATAGCCGTGCTTTTCAAAAAGATTAATAACCCTGCA
Avena sativa genome assembly, chromosome: 7D.
OX371390.1:162532995-162533014
GGTTCTAGTTCTCTATGATCTTCATGTTTG162532995TTCCCAATTCATCCATAGCCGTGCTTTTCAAAAAGATTAATAACCCTGCA
Avena sativa genome assembly, chromosome: 7D.
OX371519.1:163716010-163716029
GGTTCTAGTTCTCTATGATCTTCATGTTTG163716010TTCCCAATTCATCCATAGCCGTGCTTTTCAAAAAGATTAATAACCCTGCA
Avena sativa genome assembly, chromosome: 7D.
OX371561.1:132568783-132568802
GGTTCTAGTTCTCTATGATCTTCATGTTTG132568783TTCCCAATTCATCCATAGCCGTGCTTTTCAAAAAGATTAATAACCCTGCA
Avena sativa genome assembly, chromosome: 7D.
OX371603.1:129944176-129944195
GGTTCTAGTTCTCTATGATCTTCATGTTTG129944176TTCCCAATTCATCCATAGCCGTGCTTTTCAAAAAGATTAATAACCCTGCA
Avena sativa genome assembly, chromosome: 7D.
OX371624.1:128957820-128957839
GGTTCTAGTTCTCTATGATCTTCATGTTTG128957820TTCCCAATTCATCCATAGCCGTGCTTTTCAAAAAGATTAATAACCCTGCA
Avena sativa genome assembly, chromosome: 7D.
OX371666.1:131346882-131346901
GGTTCTAGTTCTCTATGATCTTCATGTTTG131346882TTCCCAATTCATCCATAGCCGTGCTTTTCAAAAAGATTAATAACCCTGCA
Trifolium subterraneum genome assembly, chromosome: 4.
OX637464.1:15658474-15658493
CTTGCTCTCTACTCCAATAACTGCTACTAC15658474TTCCCAATTCATCCATAGCCAGTTCAATCTCAAAATTTATATTTTGATTT
Avena sativa genome assembly, chromosome: 7D.
OX637738.1:130468738-130468757
GGTTCTAGTTCTCTATGATCTTCATGTTTG130468738TTCCCAATTCATCCATAGCCGTGCTTTTCAAAAAGATTAATAACCCTGCA
Avena sativa genome assembly, chromosome: 7D.
OX637759.1:161697485-161697504
GGTTCTAGTTCTCTATGATCTTCATGTTTG161697485TTCCCAATTCATCCATAGCCGTGCTTTTCAAAAAGATTAATAACCCTGCA
Trifolium fragiferum genome assembly, chromosome: 4.
OX940792.1:18632127-18632146
CTTGCTCTCTACTCCAATCACAGCTACTAT18632127TTCCCAATTCATCCATAGCCAAAATTTAGATTGTGATTTTAGTTTCTTGT
Trifolium occidentale genome assembly, chromosome: 5.
OZ060772.1:53685743-53685762
CTTGCTCTCTACTCCAATCACAGCTACTAC53685743TTCCCAATTCATCCATAGCCAATTCAATTCAAAAGATTGTGTTTCTTGTG
Avena sativa genome assembly, chromosome: 7D.
OZ077680.1:130046974-130046993
GGTTCTAGTTCTCTATGATCTTCATGTTTG130046974TTCCCAATTCATCCATAGCCGTGCTTTTCAAAAAGATTAATAACCCTGCA
Methylocapsa sp. D3K7 chromosome, complete genome.
CP123229.1:922031-922050
AGGTATGGGAACGATGTTTTGTCATGTCGA922031TTCCCAATTCATCCATAGCCGCAATGGCAAAGCCATCGGATTGACCGCGC
Brachyptera risi genome assembly, chromosome: 8.
OZ023334.1:9451919-9451938
TTTCATTGTTTCATGAAACAAAATCATTGT9451919TTCCCAATTCATCCATAGCCTTAATTGGGAAACAATGATTTTGTATCAAG
Trifolium repens isolate ACLI19 chromosome 08_0cc.
CP125850.1:17016252-17016271
CACAAGAAACACAATCTTTTGAATTGAATT17016252GGCTATGGATGAATTGGGAAGTAGTAGCTGTGATTGGAGTAGAGAGCAAG
Avena byzantina genome assembly, chromosome: 7D.
OU342377.1:176765581-176765600
TGCAGGGTTATTAATCTTTTTGAAAAGCAC176765581GGCTATGGATGAATTGGGAACAAACATGAAGATCATAGAGAACTAGAACC
Avena sativa genome assembly, chromosome: 7D.
OX371687.1:136470501-136470520
TGCAGGGTTATTAATCTTTTTGAAAAGCAC136470501GGCTATGGATGAATTGGGAACAAACATGAAGATCATAGAGAACTAGAACC
Avena sativa genome assembly, chromosome: 7D.
OX371708.1:116580081-116580100
TGCAGGGTTATTAATCTTTTTGAAAAGCAC116580081GGCTATGGATGAATTGGGAACAAACATGAAGATCATAGAGAACTAGAACC
Cetorhinus maximus genome assembly, chromosome: 3.
OZ077449.1:4613090-4613109
CCACAGAATGAGCAATAAATGCTGCAAGTT4613090GGCTATGGATGAATTGGGAAAGTACACAAAGAAATGACAGTATACAGGCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCCCAATTCATCCATAGCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCCCAATTCATCCATAGCC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.257 | 0.248 | search_plus_done; http://172.18.8.135:50900/match?q=TTCCCAATTCATCCATAGCC&k=0&no_gap=0&offset=0&limit=50
0.409 | 0.152 | search_minus_done; http://172.18.8.135:50900/match?q=GGCTATGGATGAATTGGGAA&k=0&no_gap=0&offset=0&limit=32
0.413 | 0.004 | cgi_end;

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