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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:40:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Dianthus caryophyllus mRNA, clone: CES08K01, 5' end sequence.
FY385360.1:339-358
AACCCAATCATTCAATGTTGAGCAGAAAGT339TTCCTCGTAAACCCAGTTGCGCAGTTTTGCAGACCATTCCCTCATTTTCG
Dianthus caryophyllus mRNA, clone: CFES02M03, 5' end sequence.
FY394834.1:348-367
AACCCAATCATTCAATGTTGAGCAGAAAGT348TTCCTCGTAAACCCAGTTGCGCAGTTTTGCAGACCATTCCCTCATTTTCG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.647.C1.
FX297863.1:360-379
AACCCAATCATTCAATGTTGAGCAGAAAGT360TTCCTCGTAAACCCAGTTGCGCAGTTTTGCAGACCATTCCCTCATTTTCG
Netelia virgata genome assembly, chromosome: 1.
OX637863.1:54116574-54116593
CGTTCATTGCCGCCATCGTCGTCGCCGTCG54116574TTCCTCGTAAACCCAGTTGCTGTTGAGCCTTGACGAATGGTGACTGCGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCCTCGTAAACCCAGTTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCCTCGTAAACCCAGTTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.362 | 0.353 | search_plus_done; http://172.18.8.135:50400/match?q=TTCCTCGTAAACCCAGTTGC&k=0&no_gap=0&offset=0&limit=50
0.451 | 0.089 | search_minus_done; http://172.18.8.135:50400/match?q=GCAACTGGGTTTACGAGGAA&k=0&no_gap=0&offset=0&limit=46
0.451 | 0.000 | cgi_end;

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