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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:49:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-39199 Leaf Coffea canephora cDNA clone cccl31i13 5', mRNA sequence.
DV694624.1:211-231
ACAGAACAGTGCCAAACTAGTAATTGGGAA211TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGAGAAGAAT
CC-L01_036_A10 Coffea young leaves Coffea canephora cDNA clone CC-L01_036_A10, mRNA sequence.
EE194305.1:144-164
ACAGAACAGTGCCAAACTAGTAATTGGGAA144TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGAGAAGNNT
CC-F01_007_G12 Cherry of different development stage Coffea canephora cDNA clone CC-F01_007_G12, mRNA sequence.
EE197025.1:146-166
ACAGAACAGTGCCAAACTAGTATTTGGGAA146TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
CC-F01_011_M02 Cherry of different development stage Coffea canephora cDNA clone CC-F01_011_M02, mRNA sequence.
EE198162.1:181-201
ACAGAACAGTGCCAAACTAGTATTTGGGAA181TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
TransId-207523 CACATN1 Coffea arabica cDNA clone CACATN1-2723TV similar to F3H9.20 protein - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT002536.1:301-321
ACAGAACAGTGCCAAACTAGTAACCGGGAA301TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
TransId-270825 CarCatLeEnri2 Coffea arabica cDNA clone CarCatLeEnri2_25-D02-PAL17d similar to F3H9.20 protein - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT017227.1:222-242
ACAGAACAGTGCCAAACTAGTAACTGGGAA222TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
CC00-XX-EC1-021-B05-EC.F Coffea canephora EC1 Coffea canephora cDNA clone CC00-XX-EC1-021-B05-EC, mRNA sequence.
GT656609.1:210-230
ACAGAACAGTGCCAAACTAGTAATTGGGAA210TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGAGAAGAAT
CR00-XX-FV2-004-G03-EM.F Coffea racemosa FV2 Coffea racemosa cDNA clone CR00-XX-FV2-004-G03-EM, mRNA sequence.
GT664239.1:420-440
ACAGAACAGTGCCAAACTAGTAATTGGGAA420TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTAGCTA
CA00-XX-RM1-033-B04-EP.F Coffea arabica RM1 Coffea arabica cDNA clone CA00-XX-RM1-033-B04-EP, mRNA sequence.
GT709952.1:150-170
ACAGAACAGTGCCAAACTAGTAACTGGGAA150TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
CA00-XX-BP1-008-G07-JM.F Coffea arabica BP1 Coffea arabica cDNA clone CA00-XX-BP1-008-G07-JM, mRNA sequence.
GT720985.1:171-191
ACAGAACAGTGCCAAACTAGTAACTGGGAA171TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
CA00-XX-BP1-071-A05-EZ.F Coffea arabica BP1 Coffea arabica cDNA clone CA00-XX-BP1-071-A05-EZ, mRNA sequence.
GT720986.1:164-184
ACAGAACAGTGCCAAACTAGTAACTGGGAA164TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
CA00-XX-BP1-013-B07-JF.F Coffea arabica BP1 Coffea arabica cDNA clone CA00-XX-BP1-013-B07-JF, mRNA sequence.
GT720987.1:184-204
ACAGAACAGTGCCAAACTAGTAACTGGGAA184TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
CA00-XX-SI3-043-C10-EM.F Coffea arabica SI3 Coffea arabica cDNA clone CA00-XX-SI3-043-C10-EM, mRNA sequence.
GW433309.1:249-269
ACAGAACAGTGCCAAACTAGTAACTGGGAA249TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA
CA00-XX-LV5-061-F04-SB.F Coffea arabica LV5 Coffea arabica cDNA clone CA00-XX-LV5-061-F04-SB, mRNA sequence.
GW491122.1:27-47
AACAGTGCCAAACTAGTAATTGGGAA27TTCTGGCCGATTGATTGTGATCCTCCCGCGGAATCTGGAAAGGAGAAGAAT
CA00-XX-LV5-051-D02-AB.F Coffea arabica LV5 Coffea arabica cDNA clone CA00-XX-LV5-051-D02-AB, mRNA sequence.
GW492500.1:249-269
ACAGAACAGTGCCAAACTAGTAACTGGGAA249TTCTGGCCGATTGATTGTGATCCTCTTGTGGAATCTGGAAAGGGGTATCTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCTGGCCGATTGATTGTGAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCTGGCCGATTGATTGTGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.129 | 1.120 | search_plus_done; http://172.18.8.135:50400/match?q=TTCTGGCCGATTGATTGTGAT&k=0&no_gap=0&offset=0&limit=50
1.224 | 0.095 | search_minus_done; http://172.18.8.135:50400/match?q=ATCACAATCAATCGGCCAGAA&k=0&no_gap=0&offset=0&limit=35
1.224 | 0.000 | cgi_end;

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