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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:48:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mus musculus molossinus genome assembly, chromosome: 15.
OW971672.1:16450176-16450194
AGGCAGGTAATGGTACTGACCACTTTGTCA16450176TTCTTGGGTCCCTTTCCAATTTAGGTTTTGCTGTCATAGAGTCTTGCAA
Mus musculus musculus genome assembly, chromosome: 15.
OW971777.1:16555620-16555638
AGGCAGGTAATGGTACTGACCACTTTGTCA16555620TTCTTGGGTCCCTTTCCAATTTAGGTTTTGCTGTCATAGAGTCTTGCAA
Furcifer pardalis isolate Fpa_1 chromosome 4.
CP126893.1:117712016-117712034
GAAGCTTTAAACATGGACTTCCTGATGGAC117712016TTCTTGGGTCCCTTTCCAACTCTTTAATTCTATGAATCTAATTCAGTTC
Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY737511.1:162557200-162557218
CATGTGGGTTTTCTGGTACTCCCTCAAAGC162557200TTCTTGGGTCCCTTTCCAACCACAAAAAATCGTCAAGAAGTTTTGGGCG
Viola odorata genome assembly, chromosome: 8.
OY829544.1:7277343-7277361
TGGAAGCATTTTGAGCCTTCTTGCATGTCA7277343TTCTTGGGTCCCTTTCCAATACATTCTTATATGGTGTCTGGGATACATC
Narthecium ossifragum genome assembly, chromosome: 8.
OY986970.1:8565821-8565839
GCAGAAATTTTTTATGTCTTGGGTATTGAC8565821TTCTTGGGTCCCTTTCCAACTTCATTTGGCTTCCAATACATTTTAGTTG
Blastobasis adustella genome assembly, chromosome: 10.
OU026123.1:14519519-14519537
TACATACATACATACATTCGAGTATGAATT14519519TTCTTGGGTCCCTTTCCAAACAATCTATTCGTTTGGACTTGTAGATGTA
Bicyclus anynana genome assembly, chromosome: 6.
OX359210.1:13778057-13778075
AGTAGAGCTCTTAGGAATGCAATTTCCTAT13778057TTCTTGGGTCCCTTTCCAATCGTTTGACGATCATAAGCGCTTTCAAGTT
Acomys kempi genome assembly, chromosome: 7.
OU015361.1:13177575-13177593
CCTGTCATGATATAACAGATACCACCTCAG13177575TTGGAAAGGGACCCAAGAAGTTAGACTAAGGAGTGTTGCCGACTCAATT
Acomys dimidiatus genome assembly, chromosome: 7.
OU015380.1:13474844-13474862
CCTGTCCTGATATAACAGATACCACCTCAG13474844TTGGAAAGGGACCCAAGAAGTTAGACTAAGGAGTGTTGCTGACTCAATT
Capricornis sumatraensis isolate serow.1 chromosome 3.
CP135628.1:35937556-35937574
GGTGACAATTATTTTTTAATGAATCTTCTT35937556TTGGAAAGGGACCCAAGAAGGAAGCCACAGGGTTAAATCAAAGCACAAA
Phalacrocorax aristotelis genome assembly, chromosome: 12.
OX451235.1:8250155-8250173
ATGGCTACTAGAAGCAGTCTGCCTGACTAC8250155TTGGAAAGGGACCCAAGAAGGCTGACAACCTGATTTTATTTTTTACTTT
Fragaria x ananassa cultivar Benihoppe chromosome 2.
CP139774.1:6061979-6061997
AATCCATTTTGATTCAAGATACAATGATAT6061979TTGGAAAGGGACCCAAGAAGTGATATGGAACCACTAGCTAGTTTAGATC
Fragaria x ananassa cultivar Benihoppe chromosome 1.
CP139775.1:7234963-7234981
AAATCCATTTTGATTCAAGATACAATGATA7234963TTGGAAAGGGACCCAAGAAGTGATATGGAACCACTAGCTAGTTTAGATC
Fragaria vesca subsp. americana clone fosmid f01H23 sequence, complete sequence.
KU288758.1:7069-7087
AAATCCATTTTGATTCAAGATACAATGATA7069TTGGAAAGGGACCCAAGAAGTGATATGGAACCACTAGCTAGTTTAGATC
Chionographis japonica genome assembly, chromosome: 1.
OX393549.1:68272935-68272953
CGAATAGAAACTTTCAACAATTAGGAGATA68272935TTGGAAAGGGACCCAAGAAGTCCAACCCCCACTGTTGGAGCGGCCAGGG
Comarum palustre genome assembly, chromosome: 17.
OX637588.1:5985143-5985161
AAATCCAATTTGATTCAAGATACAATGATA5985143TTGGAAAGGGACCCAAGAAGTGATATAGAACCACTAGTTAGTTTAGATC
Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737378.1:170518122-170518140
CGCCCAAAACTTCTTGATGATTTTTTCTGG170518122TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACAAG
Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737385.1:169057211-169057229
CGCCCAAAACTTCTTGATGATTTTTTCTGG169057211TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACAAG
Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737400.1:173564994-173565012
CGCCCAAAACTTCTTGACGATTTTTTCTGG173564994TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG
Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737428.1:171616679-171616697
CGCCCAAAACTTCTTGATGATTTTTTCTGG171616679TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACAAG
Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737435.1:174361015-174361033
CGCCCAAAACTTCTTGACGATTTTTTGTGG174361015TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG
Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737461.1:150297569-150297587
CGCCCAAAACTTCTTGACAATTTTTTGTGG150297569TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG
Hordeum bulbosum genome assembly, chromosome: 2H_3.
OY737475.1:158540338-158540356
CGCCCAAAACTTCTTGACGATTTTTTGTGG158540338TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG
Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737490.1:164521625-164521643
CTCCCAAAACTTCTTGACGATTTTTTGTGG164521625TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG
Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737497.1:159016003-159016021
CGCCCAAAACTTCTTGACGATTTTTTGTGG159016003TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG
Hordeum bulbosum genome assembly, chromosome: 2H_3.
OY737504.1:180065504-180065522
CGCCCAAAACTTCTTGACGATTTTTTGTGG180065504TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG
Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737519.1:171864061-171864079
CGCCCAAAACTTCTTGATGATTTTTTCTGG171864061TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACAAG
Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY737540.1:167852863-167852881
CGCCCAAAACTTCTTGATGATTTTTTCTGG167852863TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACAAG
Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737612.1:164238556-164238574
CGCCCAAAACTTCTTGATGATTTTTTCTGG164238556TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACAAG
Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737619.1:164739820-164739838
CGCCCAAAACTTCTTGACGATTTTTTGTGG164739820TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG
Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737648.1:160087403-160087421
CGCCCAAAACTTCTTGACGATTTTTTGTGG160087403TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG
Hordeum bulbosum genome assembly, chromosome: 2H_3.
OY737655.1:164342749-164342767
CGCCCAAAACTTCTTGATGATTTTTTGTGG164342749TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG
Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY737662.1:177657016-177657034
CGCCCAAAACTTCTTGACGATTTTTTGTGG177657016TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG
Hordeum bulbosum genome assembly, chromosome: 2H_3.
OY737881.1:160481895-160481913
CGCCCAAAACTTCTTGACGATTTTTTGTGG160481895TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG
Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY737888.1:160188507-160188525
CGCCCAAAACTTCTTGACGATTTTTTGTGG160188507TTGGAAAGGGACCCAAGAAGCTTTGAGGGAGTACCAGAAAACCCACATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCTTGGGTCCCTTTCCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCTTGGGTCCCTTTCCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.165 | 0.156 | search_plus_done; http://172.18.8.135:50400/match?q=TTCTTGGGTCCCTTTCCAA&k=0&no_gap=0&offset=0&limit=50
0.288 | 0.123 | search_minus_done; http://172.18.8.135:50400/match?q=TTGGAAAGGGACCCAAGAA&k=0&no_gap=0&offset=0&limit=42
0.307 | 0.018 | cgi_end;

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