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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-07 12:42:35, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica napus cultivar Xiang5A chromosome 16.
CP123891.1:64564066-64564085
GGGTCAGGTAAGTAACGTGTGGGAGCAGTC64564066TTGACTGCAGGAAATGCAAGAACTTGTTGGACTATGCTCATTGTCATCTT
Eutrema japonicum cultivar Magic isolate CNU_PCGL_DJ_WASABI_2024 chromosome A07.
CP163467.1:4136129-4136148
TCAGGCAAGTAATAACCCATAGGAGCAGTC4136129TTGACTGCAGGAAATGCAAGACCTTGTTGGTGAACTCTGCTCAGTGTCAT
Brassica napus cultivar Xiang5A chromosome 19.
CP151914.1:3987142-3987161
AAGATGACAATGAGCATAGTCCAACAAGTT3987142CTTGCATTTCCTGCAGTCAAGACTGCTCCCACACGTTACTTACCTGACCC
Brassica napus genome assembly, chromosome: C09.
HG994373.1:4598856-4598875
AAGATGACAATGAGCATAGTCCAACAAGTT4598856CTTGCATTTCCTGCAGTCAAGACTGCTCCCACACGTTACTTACCTGACCC
Brassica oleracea HDEM genome, scaffold: C9.
LR031875.1:4774198-4774217
AAGATGACAATGAGCATAGTCCAACAAGTT4774198CTTGCATTTCCTGCAGTCAAGACTGCTCCCACACGTTACTTACCTGACCC
Brassica oleracea genome assembly, chromosome: 9.
OZ281592.1:4764837-4764856
AAGATGACAATGAGCATAGTCCAACAAGTT4764837CTTGCATTTCCTGCAGTCAAGACTGCTCCCACACGTTACTTACCTGACCC
Brassica oleracea genome assembly, chromosome: 9.
OZ281602.1:4823500-4823519
AAGATGACAATGAGCATAGTCCAACAAGTT4823500CTTGCATTTCCTGCAGTCAAGACTGCTCCCACACGTTACTTACCTGACCC
Brassica oleracea var. botrytis genome assembly, chromosome: 9.
OZ282434.1:4525589-4525608
AAGATGACAATGAGCATAGTCCAACAAGTT4525589CTTGCATTTCCTGCAGTCAAGACTGCTCCCACACGTTACTTACCTGACCC
Agrochola macilenta genome assembly, chromosome: 24.
OU753576.1:12327769-12327788
ACTGACAGATACCTAGCAGTTGATTGAAAA12327769CTTGCATTTCCTGCAGTCAAGACGTCGTTTCTTACACCGTGGTATATTAG
Mimachlamys varia genome assembly, chromosome: 19.
OX392545.1:35414941-35414960
ATCGAAAAACGGCCAGTCTTGAAAGTAAGC35414941CTTGCATTTCCTGCAGTCAAAACTATGTTGAAATTATGCCGGCTTTGAGA
Mesapamea secalis genome assembly, chromosome: 7.
OZ220978.1:22141223-22141242
GGCCAGTTTTTTTCTTTATTTTCATCATCA22141223CTTGCATTTCCTGCAGTCAACAATATGGAAGAGTTAGGAACGTATCTTCA
Dioctria baumhaueri genome assembly, chromosome: 3.
OZ289147.1:124692121-124692140
GCTTCCATTTGGGGAACTGCAAAATGACAT124692121CTTGCATTTCCTGCAGTCAAAATTCAAAATTCAAACATCTTTAAAGCTCT
Dioctria baumhaueri genome assembly, chromosome: 3.
OZ289147.1:133027298-133027317
GCTTCCATTTGGGGAACTGTAAAATGACAT133027298CTTGCATTTCCTGCAGTCAAAATTCAAAATTCAAAAATTTTTAAAGCTCT
Dioctria baumhaueri genome assembly, chromosome: 3.
OZ289155.1:115944940-115944959
GCTTCCATTTGGGGAACTGCAAAATGACAT115944940CTTGCATTTCCTGCAGTCAAAATTCAAAATTCAAACATCTTTAAAGCTCT
Triturus cristatus genome assembly, chromosome: 1_2.
OZ123757.1:868925824-868925843
TGTCATTAGTGGTACCAAAATACCAAGCAA868925824CTTGCATTTCCTGCAGTCAATAAAGTTGCGGGAAGCACAGATGTGCAAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGACTGCAGGAAATGCAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGACTGCAGGAAATGCAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.488 | 0.479 | search_plus_done; http://172.18.8.135:50900/match?q=TTGACTGCAGGAAATGCAAG&k=0&no_gap=0&offset=0&limit=50
1.028 | 0.539 | search_minus_done; http://172.18.8.135:50900/match?q=CTTGCATTTCCTGCAGTCAA&k=0&no_gap=0&offset=0&limit=48
1.036 | 0.009 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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