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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 08:33:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EST1232361 ESTSYN-F Musa acuminata AAA Group cDNA clone pESTSYNF-6C17 5', mRNA sequence.
ES432154.1:151-170
ATAATTGACAATTCTCCACAGGTTTTCCAT151TTGCATGTTAACAACGGCATACCAATTGAGAGTTGGTTTGATGACCCATC
estPama_needle_2159-800_3 Pama-Needle-EST Picea mariana cDNA 3', mRNA sequence.
JZ082404.1:8-27
TTTTTTT8TTGCATGTTAACAACGGCATCACGCCGTATACATTTTATTTATATCTGAT
TSA: Musa acuminata AAA Group Unigene67075_B1 mRNA sequence.
JV315703.1:160-179
ATAATTGACAATTCTCCACAGGTTTTCCAT160TTGCATGTTAACAACGGCATACCAATTGAGAGTTGGTTTGATGACCCATC
TSA: Musa acuminata AAA Group Unigene75073_NK1 mRNA sequence.
JV388047.1:160-179
ATAATTGACAATTCTCCACAGGTTTTCCAT160TTGCATGTTAACAACGGCATACCAATTGAGAGTTGGTTTGATGACCCATC
Musa troglodytarum cultivar karat chromosome 4.
CP097506.1:15026993-15027012
GATGGGTCATCAAACCAACTCTCGATTGGT15026993ATGCCGTTGTTAACATGCAAATGGAAAACCTGAAAATATGGGGAGATAAA
Musa acuminata subsp. malaccensis isolate AA chromosome 4.
CP126373.1:11379767-11379786
GATGGGTCATCAAACCAACTCTCAATTGGT11379767ATGCCGTTGTTAACATGCAAATGGAAAACCTGAAAAATAAGGGGAGAGAA
Musa acuminata subsp. malaccensis isolate AA chromosome 15.
CP126384.1:11424647-11424666
GATGGGTCATCAAACCAACTCTCAATTGGT11424647ATGCCGTTGTTAACATGCAAATGGAAAACCTGAAAAATAAGGGGAGAGAA
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A04.
HG996469.1:11197401-11197420
GATGGGTCATCAAACCAACTCTCAATTGGT11197401ATGCCGTTGTTAACATGCAAATGGAAAACCTGAAAAATAAGGGGAGAGAA
Musa schizocarpa genome assembly, chromosome: S04.
LS990918.1:12482534-12482553
GATGGGTCATCAAACCAACTCTCAATTGGT12482534ATGCCGTTGTTAACATGCAAATGGAAAACCTGAAAAATAAGGGGAGAGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGCATGTTAACAACGGCAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGCATGTTAACAACGGCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.523 | 0.514 | search_plus_done; http://172.18.8.135:50400/match?q=TTGCATGTTAACAACGGCAT&k=0&no_gap=0&offset=0&limit=50
0.627 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=ATGCCGTTGTTAACATGCAA&k=0&no_gap=0&offset=0&limit=46
0.630 | 0.003 | cgi_end;

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