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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 12:14:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

odd88f05.g1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BH961212.1:208-227
TTTACCACATTCTCTGCAACAAAGTTGTTG208TTGCTGTTTCATAGCCACCAACCTCTTCTTCTTCTTCTTCTTCTTCTTCT
Brassica napus genome assembly, chromosome: C03.
HG994367.1:55326440-55326459
TTTACCACATTCTCTGCAACAAAGTTGTTG55326440TTGCTGTTTCATAGCCACCAACCTCTTCTTCTTCTTCTTCTTCTTCTTCT
Brassica oleracea HDEM genome, scaffold: C3.
LR031872.1:55986288-55986307
TTTACCACATTCTCTGCAACAAAGTTGTTG55986288TTGCTGTTTCATAGCCACCAACCTCTTCTTCTTCTTCTTCTTCTTCTTCT
Brassica napus cultivar Xiang5A chromosome 18.
CP123893.1:19311034-19311053
AGAAGAAGAAGAAGAAGAAGAAGAAGAGGT19311034TGGTGGCTATGAAACAGCAACAACAACTTTGTTGCAGAGAATGTGGTAAA
Lithophane leautieri genome assembly, chromosome: 25.
OX424483.1:7794389-7794408
AGAAAATATTCCTGTCTGGAAATATAGTTG7794389TGGTGGCTATGAAACAGCAACACATTCTTCTCCTTCAGGTGTCACCAACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGCTGTTTCATAGCCACCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGCTGTTTCATAGCCACCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.317 | 0.308 | search_plus_done; http://172.18.8.135:50400/match?q=TTGCTGTTTCATAGCCACCA&k=0&no_gap=0&offset=0&limit=50
0.407 | 0.090 | search_minus_done; http://172.18.8.135:50400/match?q=TGGTGGCTATGAAACAGCAA&k=0&no_gap=0&offset=0&limit=47
0.408 | 0.001 | cgi_end;

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