GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-05 02:01:36, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Camellia sinensis mRNA, clone: RT7G11, unspecified EST, sequenced using T7 primer, expressed in roots.
FS951913.1:20-39
CTCACACTCACAAGCCTTT20TTGTCAGAAACGGTGACTCCGGAGAGAGAGAGAGAGAGGAGCTCAATCTA
EST1067 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07092008-CHAG_08_58.M13+_B08.ab1, mRNA sequence.
GE650740.1:32-51
ATCGGCCATTACGGCCGGGGACAAGCCTTT32TTGTCAGAAACGGTGACTCCGGAGAGAGAGAGAGAGAGAGAGGAGCTCAA
EST2180 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_23_29.M13+_E04.ab1, mRNA sequence.
GE651853.1:36-55
GCCATTACGGCCGGGGACTCACAAGCCTTT36TTGTCAGAAACGGTGACTCCGGAGAGAGAGAGAGAGAGAGGAGCTCAATC
EST2376 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_26_06.M13+_F01.ab1, mRNA sequence.
GE652049.1:30-49
TATCGGCCATTACGGCCGGGGAAGCCTTT30TTGTCAGAAACGGTGACTCCGGAGAGAGAGAGAGAGAGGAGCTCAATCTA
Camellia sinensis genome assembly, chromosome: 7.
OZ007450.1:186197268-186197287
CGGCATGTTCTCTCACACTCACAAGCCTTT186197268TTGTCAGAAACGGTGACTCCGGAGAGAGAGAGAGAGAGGGAGAGAGAGAG
Camellia sinensis genome assembly, chromosome: 7.
OZ007465.1:213330291-213330310
CGGCATGTTCTCTCACACTCACAAGCCTTT213330291TTGTCAGAAACGGTGACTCCGGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
Camellia sinensis genome assembly, chromosome: 7.
OZ007480.1:198819398-198819417
CGGCATGTTCTCTCACACTCACAAGCCTTT198819398TTGTCAGAAACGGTGACTCCGGAGAGAGAGAGAGAGAGAGAGAGAGAGGA
Stegodyphus mimosarum isolate Smim_Weenen_A chromosome 10.
CP160535.1:28063758-28063777
AAAAATCTGTTTGTATGCAAGTTCCTTGCT28063758TTGTCAGAAACGGTGACTCCTAGATCCATCAAATTTTGAACACATATAGC
Callogorgia gracilis genome assembly, chromosome: 5.
OZ123361.1:10729651-10729670
AAGGAAAGAATAAGATTTTAAAAAACCTGT10729651TTGTCAGAAACGGTGACTCCAGAATGTTTTCCCTTCTTTTCGAAAGATAC
Agrostemma githago genome assembly, chromosome: 10.
OY288248.1:73829683-73829702
GAAAAGTCAAACCTCCGTGTTCCACAGGGA73829683GGAGTCACCGTTTCTGACAAGCTCTTCTCTGAATTCTGCTGTTGTGGGTC
Agrostemma githago genome assembly, chromosome: 19.
OY288257.1:64140720-64140739
GAAAAGTCAAACCTCCGTGTTCCACAGGGA64140720GGAGTCACCGTTTCTGACAAGCTCTTCTCTGAATTCTGGCGTTGTGGGTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGTCAGAAACGGTGACTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGTCAGAAACGGTGACTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.379 | 0.370 | search_plus_done; http://172.18.8.135:50900/match?q=TTGTCAGAAACGGTGACTCC&k=0&no_gap=0&offset=0&limit=50
0.410 | 0.031 | search_minus_done; http://172.18.8.135:50900/match?q=GGAGTCACCGTTTCTGACAA&k=0&no_gap=0&offset=0&limit=41
0.412 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).