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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 20:14:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 5, clone: LjT46H07, TM0909.
AP010642.1:78103-78122
CACGTAGGTAGAACCATGGTGACAACATAT78103TTGTGCATCAAAACTAGCTCAACTATAATAATAATAATAATAATAATAAT
Lotus japonicus genomic DNA, chromosome 5, clone: LjT45M19, TM1126b.
AP010529.1:6953-6972
CACGTAGGTAGAACCATGGTGACAACATAT6953TTGTGCATCAAAACTAGCTCAACTATAATAATAATAATAATAATAATAAT
Phorcus lineatus genome assembly, chromosome: 9.
OV121089.1:14113277-14113296
TCAGCCTTTGGCCTTTATTTAGGGCATCCA14113277TTGTGCATCAAAACTAGCTCATTTACAGCAGGGATTGTTGTGCTCACAGA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:56638885-56638904
ATTATTATTATTATTATTATTATTATAGTT56638885GAGCTAGTTTTGATGCACAAATATGTTGTCACCATGGTTCTACCTACGTG
Lotus japonicus Fe-superoxide dismutase 2 precursor (sodB) gene, complete cds.
AY525604.1:829-848
ATTATTATTATTATTATTATTATTATAGTT829GAGCTAGTTTTGATGCACAAATATGTTGTCACCATGGTTCTACCTACGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGTGCATCAAAACTAGCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGTGCATCAAAACTAGCTC | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.381 | 0.372 | search_plus_done; http://172.18.8.135:50400/match?q=TTGTGCATCAAAACTAGCTC&k=0&no_gap=0&offset=0&limit=50
0.486 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=GAGCTAGTTTTGATGCACAA&k=0&no_gap=0&offset=0&limit=47
0.487 | 0.002 | cgi_end;

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