GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-04 21:21:17, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 2.
CP141911.1:5680242-5680261
GAGGAGTTGGAGTTCAGTGACGACCTTGAC5680242TTTCTTTTGGCTCTCCCTGAGGAAGGTGAGGCATCCCCAGAGCATGACCC
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141928.1:5475577-5475596
GAGGAGTTGGAGTTCAGTGACGACCTTGAC5475577TTTCTTTTGGCTCTCCCTGAGGAAGGTGAGGCAGCCCCAGAGCATGACCC
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:5700688-5700707
GAGGAGTTGGAGTTCAGTGACGACCTTGAC5700688TTTCTTTTGGCTCTCCCTGAGGAAGGTGAGGCAGCCCCAGAGCATGACCC
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:6565396-6565415
GAGGAGTTGGAGTTCAGTGACGACCTTGAC6565396TTTCTTTTGGCTCTCCCTGAGGAAGGTGAGGCAGCCCCAGAGCATGACCC
Populus tremula genome assembly, chromosome: 11.
OZ066592.1:2595446-2595465
TAGATTAAACTTCAGGGTTTCAATCACTAC2595446TTTCTTTTGGCTCTCCCTGAAACCGGCACAAGTCAGATTCTGAATCACCA
Matricaria chamomilla genome assembly, chromosome: 6.
OZ174301.1:62072004-62072023
TGTGTAACACGATCTCTGTGGAGGTGGTTT62072004TTTCTTTTGGCTCTCCCTGATTTTTGGAATCAGGGTTCTCAAGGTGTTGC
Prunus avium genome assembly, chromosome: 8.
OZ278094.1:28450038-28450057
AAGTTCTCTTTCTCGTGATCTTTGTTTGGT28450038TTTCTTTTGGCTCTCCCTGAGTTTACGAAAAAAGAAAAAAAATATATGTA
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141954.1:29979102-29979121
GGGTCATGCTCTGGGGCTGCCTCACCTTCC29979102TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:30279322-30279341
GGGTCATGCTCTGGGGCTGCCTCACCTTCC30279322TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143376.1:31011801-31011820
GGGTCATGCTCTGGGGCTGCCTCACCTTCC31011801TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Malus ioensis cultivar PI590015 chromosome 2.
CP154725.1:28677886-28677905
GGATCATGCTCTGGGGCTGCCTCACCTTCC28677886TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Malus ioensis cultivar PI590015 chromosome 2.
CP154742.1:32445449-32445468
GGATCATGCTCTGGGGCTGCCTCACCTTCC32445449TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Malus coronaria cultivar PI590014 chromosome 2.
CP154759.1:32002585-32002604
GGATCATGCTCTGGGGCTGCCTCACCTTCC32002585TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Malus coronaria cultivar PI590014 chromosome 2.
CP154776.1:33188024-33188043
GGATCATGCTCTGGGGCTGCCTCACCTTCC33188024TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Chaenomeles sinensis isolate sampleA chromosome 07.
CP162370.1:29066030-29066049
GGGTCATGCTCTGGGGCTGCCTCACCTTCC29066030TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCATTGAACTCCAACTCCTC
Malus domestica cultivar WA 38 chromosome 2A.
CP165702.1:32557723-32557742
GGGTCATTCTCTGGGGCTGCCTCACCTTCC32557723TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACCCCAACTCCTC
Malus domestica cultivar Golden Delicious chromosome 02.
CP168766.1:33150879-33150898
GGGTCATTCTCTGGGGCTGCCTCACCTTCC33150879TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:32386341-32386360
GGGTCATTCTCTGGGGCTGCCTCACCTTCC32386341TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Malus domestica genome assembly, chromosome: 2.
OU696678.1:32519096-32519115
GGGTCATGCTCTGGGGCTGCCTCACCTTCC32519096TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Malus domestica genome assembly, chromosome: 2.
OU744543.1:32252862-32252881
GGGTCATTCTCTGGGGCTGCCTCACCTTCC32252862TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Malus domestica genome assembly, chromosome: 2.
OU744954.1:32035178-32035197
GGGTCATTCTCTGGGGCTGCCTCACCTTCC32035178TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Matricaria chamomilla var. recutita genome assembly, chromosome: 6_1.
OY720572.1:63393143-63393162
GCAACACCCTGAGAACCCTGATTCCACAAA63393143TCAGGGAGAGCCAAAAGAAAAACCCACTTCCACAGAGATTGTGCTACACA
Matricaria chamomilla var. recutita genome assembly, chromosome: 6_2.
OY720581.1:63759023-63759042
GCAAGACCCTGAGAACCCTGATTCCACAAA63759023TCAGGGAGAGCCAAAAGAAAAACCCACTTCCACAGAGATTGTGCTACACA
Matricaria chamomilla var. recutita genome assembly, chromosome: 6.
OY992051.1:65017616-65017635
GCAAGACCCTGAGAACCCTGATTCCACAAA65017616TCAGGGAGAGCCAAAAGAAAAACCCACTTCCACAGAGATTGTGCTACACA
Matricaria chamomilla genome assembly, chromosome: 7.
OZ174302.1:64404099-64404118
GCAAGACCCTGAGAACCCTGATTTCACAAA64404099TCAGGGAGAGCCAAAAGAAAAACCCACTTCCACAGAGATTGTGCTACACA
Matricaria discoidea genome assembly, chromosome: 1.
OZ194546.1:117847902-117847921
GCAACACCCTAAGAACCCTGATTCCACAAA117847902TCAGGGAGAGCCAAAAGAAAAACCCACCTCCACAGAAATCATGTTACACA
Karpatiosorbus bristoliensis genome assembly, chromosome: 7C.
OZ287411.1:29227327-29227346
GGATCATGCTCTGGGGCTGCCTCACCTTCC29227327TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Karpatiosorbus bristoliensis genome assembly, chromosome: 7A.
OZ287453.1:31113977-31113996
GGATCATGCTCTGGGGCTGCCTCACCTTCC31113977TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Hermodice carunculata genome assembly, chromosome: 10.
OZ026621.1:27777886-27777905
AGTCAGATCCTGAGGCTTACAGACAGAGAC27777886TCAGGGAGAGCCAAAAGAAACCAGATGAAAACTCTGTGAAATTTGCCAGA
Flaccisagitta enflata genome assembly, chromosome: 8.
OZ231133.1:24101440-24101459
GACAATGTCATGTTAATTATCATCTCTTAT24101440TCAGGGAGAGCCAAAAGAAACTTCCAACTTTTCGATATGAAGCACCCATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTCTTTTGGCTCTCCCTGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTCTTTTGGCTCTCCCTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50900/match?q=TTTCTTTTGGCTCTCCCTGA&k=0&no_gap=0&offset=0&limit=50
0.118 | 0.024 | search_minus_done; http://172.18.8.135:50900/match?q=TCAGGGAGAGCCAAAAGAAA&k=0&no_gap=0&offset=0&limit=43
0.133 | 0.015 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).