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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 11:58:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 2.
CP141911.1:5680242-5680261
GAGGAGTTGGAGTTCAGTGACGACCTTGAC5680242TTTCTTTTGGCTCTCCCTGAGGAAGGTGAGGCATCCCCAGAGCATGACCC
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141928.1:5475577-5475596
GAGGAGTTGGAGTTCAGTGACGACCTTGAC5475577TTTCTTTTGGCTCTCCCTGAGGAAGGTGAGGCAGCCCCAGAGCATGACCC
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:5700688-5700707
GAGGAGTTGGAGTTCAGTGACGACCTTGAC5700688TTTCTTTTGGCTCTCCCTGAGGAAGGTGAGGCAGCCCCAGAGCATGACCC
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:6565396-6565415
GAGGAGTTGGAGTTCAGTGACGACCTTGAC6565396TTTCTTTTGGCTCTCCCTGAGGAAGGTGAGGCAGCCCCAGAGCATGACCC
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141954.1:29979102-29979121
GGGTCATGCTCTGGGGCTGCCTCACCTTCC29979102TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:30279322-30279341
GGGTCATGCTCTGGGGCTGCCTCACCTTCC30279322TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143376.1:31011801-31011820
GGGTCATGCTCTGGGGCTGCCTCACCTTCC31011801TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:32386341-32386360
GGGTCATTCTCTGGGGCTGCCTCACCTTCC32386341TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Malus domestica genome assembly, chromosome: 2.
OU696678.1:32519096-32519115
GGGTCATGCTCTGGGGCTGCCTCACCTTCC32519096TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Malus domestica genome assembly, chromosome: 2.
OU744543.1:32252862-32252881
GGGTCATTCTCTGGGGCTGCCTCACCTTCC32252862TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC
Malus domestica genome assembly, chromosome: 2.
OU744954.1:32035178-32035197
GGGTCATTCTCTGGGGCTGCCTCACCTTCC32035178TCAGGGAGAGCCAAAAGAAAGTCAAGGTCGTCACTGAACTCCAACTCCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTCTTTTGGCTCTCCCTGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTCTTTTGGCTCTCCCTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.159 | 0.150 | search_plus_done; http://172.18.8.135:50400/match?q=TTTCTTTTGGCTCTCCCTGA&k=0&no_gap=0&offset=0&limit=50
0.258 | 0.099 | search_minus_done; http://172.18.8.135:50400/match?q=TCAGGGAGAGCCAAAAGAAA&k=0&no_gap=0&offset=0&limit=46
0.263 | 0.005 | cgi_end;

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