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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 13:45:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Gouania willdenowi genome assembly, chromosome: 5.
LR131993.1:2471049-2471068
TTGGCCAATGTAATAGTAAATAAAAGTATT2471049TTTTTCGGATTTCCATAGCGTGTCACCCTAGAACCAATGCATATATGTGA
Dianthus caryophyllus mRNA, clone: CES05N08, 5' end sequence.
FY384301.1:424-443
CATCATCATCGACATCGACAAACCCTAACT424CGCTATGGAAATCCGAAAAAACGCAGCAAATATTCTCCTCGAAGCTCATG
Dianthus caryophyllus mRNA, clone: CES29C09, 5' end sequence.
FY393087.1:389-408
CATCATCATCGACATCGACAAACCCTAACT389CGCTATGGAAATCCGAAAAAACGCAGCAAATATTCTCCTCGAAGCTCATG
Dianthus caryophyllus mRNA, clone: CFES08K13, 5' end sequence.
FY397064.1:400-419
CATCATCATCGACATCGACAAACCCTAACT400CGCTATGGAAATCCGAAAAAACGCAGCAAATATTCTCCTCGAAGCTCATG
Dianthus caryophyllus mRNA, clone: CFES12K14, 5' end sequence.
FY398575.1:342-361
CATCATCATCGACATCGACAAACCCTAACT342CGCTATGGAAATCCGAAAAAACGCAGCAAATATTCTCCTCGAAGCTCATG
Dianthus caryophyllus mRNA, clone: CFES25_F20, 5' end sequence.
FY403328.1:427-446
CATCATCATCGACATCGACAAACCCTAACT427CGCTATGGAAATCCGAAAAAACGCAGCAAATATTCTCCTCGAAGCTCATG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.376.C1.
FX297236.1:423-442
CATCATCATCGACATCGACAAACCCTAACT423CGCTATGGAAATCCGAAAAAACGCAGCAAATATTCTCCTCGAAGCTCATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTTTCGGATTTCCATAGCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTTCGGATTTCCATAGCG | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.151 | 0.143 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTTCGGATTTCCATAGCG&k=0&no_gap=0&offset=0&limit=50
0.581 | 0.430 | search_minus_done; http://172.18.8.135:50400/match?q=CGCTATGGAAATCCGAAAAA&k=0&no_gap=0&offset=0&limit=49
0.586 | 0.004 | cgi_end;

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