GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-06 14:39:40, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 4.
CP141930.1:25290750-25290769
CAAATAAGAAAGAGAGAAGAGGAATTCCAA25290750AAAATCCAGTTTTCCACCTCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGA
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141956.1:24029423-24029442
CAAATAAGAAAGAGAGAAGAGGGATTCCAA24029423AAAATCCAGTTTTCCACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141973.1:23707368-23707387
CAAATAAGAAAGAGAGAAGAGGAATTCCAA23707368AAAATCCAGTTTTCCACCTCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGA
Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143361.1:24856607-24856626
CAAATAAGAAAGAGAGAAGAGGAATTCCAA24856607AAAATCCAGTTTTCCACCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGACA
Malus domestica cultivar Red Fuji chromosome 4.
CP147796.1:25445206-25445225
CAAATAAGAAAGAGAGAAGAGGAATTCCAA25445206AAAATCCAGTTTTCCACCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGACA
Malus domestica cultivar Red Fuji chromosome 4.
CP147821.1:24970153-24970172
CAAATAAGAAAGAGAGAAGAGGAATTCCAA24970153AAAATCCAGTTTTCCACCTCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGA
Malus domestica cultivar WA 38 chromosome 4B.
CP165687.1:25375152-25375171
CAAATAAGAAAGAGAGAAGAGGAATTCCAA25375152AAAATCCAGTTTTCCACCTCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGA
Malus domestica cultivar WA 38 chromosome 4A.
CP165704.1:24010993-24011012
CAAATAAGAAAGAGAGAAGAGGAATTCCAA24010993AAAATCCAGTTTTCCACCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGACA
Malus domestica cultivar Golden Delicious chromosome 04.
CP168768.1:25659889-25659908
CAAATAAGAAAGAGAGAAGAGGAATTCCAA25659889AAAATCCAGTTTTCCACCTCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGA
Malus domestica cultivar Golden Delicious chromosome 04.
CP168785.1:25650996-25651015
CAAATAAGAAAGAGGGAAGAGGAATTCCAA25650996AAAATCCAGTTTTCCACCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGACA
Avena eriantha genome assembly, chromosome: 3C.
OU342742.1:262538473-262538492
AACCTTGGATCTTAATTTGGAGTTTATAGG262538473AAAATCCAGTTTTCCACCTCTCATATGGCTAAGTCAAGTGTCTGCAGCTC
Malus sylvestris genome assembly, chromosome: 4.
OU696506.1:25112739-25112758
CAAATAAGAAAGAGAGAAGAGGAATTCCAA25112739AAAATCCAGTTTTCCACCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGACA
Malus domestica genome assembly, chromosome: 4.
OU696680.1:25129148-25129167
CAAATAAGAAAGAGAGAAGAGGAATTCCAA25129148AAAATCCAGTTTTCCACCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGACA
Malus domestica genome assembly, chromosome: 4.
OU744545.1:25083915-25083934
CAAATAAGAAAGAGAGAAGAGGAATTCCAA25083915AAAATCCAGTTTTCCACCTCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGA
Malus domestica genome assembly, chromosome: 4.
OU744956.1:25373689-25373708
CAAATAAGAAAGAGAGAAGAGGAATTCCAA25373689AAAATCCAGTTTTCCACCTCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGA
Malus domestica genome assembly, chromosome: 4.
OU744994.1:25187319-25187338
CAAATAAGAAAGAGAGAAGAGGAATTCCAA25187319AAAATCCAGTTTTCCACCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGACA
Pyrus communis genome assembly, chromosome: 17.
OY757084.1:16821282-16821301
CAAATAAGAAAGAGAGAAGAGGGATTCCAA16821282AAAATCCAGTTTTCCACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
Pseudomonas moorei m318 DNA, complete genome.
AP035776.2:4520952-4520971
GAAGAAATCCTCGATTTTGCACAACGCCAC4520952AAAATCCAGTTTTCCACCTCCTTGGATGGCCCTGCTTTTCTGCACAACGC
Stenurella melanura genome assembly, chromosome: 2.
OY757310.1:175012281-175012300
ATACGATGGTGTGAGATCTACTTATGTTCA175012281AAAATCCAGTTTTCCACCTCAAATGTCCAAGTTAAATCCTTAGATGACTG
Arge pagana genome assembly, chromosome: 8.
OZ018315.1:6720357-6720376
GATTAAAAATGGATCGATTTGACGAGAAAA6720357AAAATCCAGTTTTCCACCTCTCGATCCGGAATCTTCCCTCCATCGAGGTC
Monacha cantiana genome assembly, chromosome: 7.
OZ180193.1:48090820-48090839
GGCTTATTTATGAGAACCAGGCTGTTGCTG48090820AAAATCCAGTTTTCCACCTCTTCTCCTTTTGTATTGAGGTCTGTGTAACC
Chaetopelma lymberakisi genome assembly, chromosome: 22.
OZ197724.1:99691326-99691345
TGATGGTTGTTTTTAGGAAGATTATGGAGG99691326AAAATCCAGTTTTCCACCTCATCGAAATTTTCACAGGAATGAGAACCTTC
Acleris hyemana genome assembly, chromosome: Z.
OZ239358.1:31841425-31841444
CAAAAGGCAAGTTATCCGCGGTTTTATTCA31841425AAAATCCAGTTTTCCACCTCGACGTGCTGCCGCGGGCTCTGCCATAATAA
Closterotomus trivialis genome assembly, chromosome: 3.
OZ243022.1:30222537-30222556
GAATATAATTTTGAGGAACATTTTCCGATT30222537AAAATCCAGTTTTCCACCTCATTGCCTTCCAGCGTTTAGGCAGGCATTTA
Tranosemella praerogator genome assembly, chromosome: 4.
OZ287288.1:6940591-6940610
AAGAGGTACTTATTGCACGACCAACGAAAG6940591AAAATCCAGTTTTCCACCTCTCTAAAACAAGTGCGTTCTGCTTTCAGTTC
Thalassophryne amazonica genome assembly, chromosome: 6.
LR722971.1:77157002-77157021
ACTCCATTAGAAAATTGACATACGCAATTC77157002AAAATCCAGTTTTCCACCTCCATTTCTAACGTTCTCTGATCCAGTTCTGT
Pelobates cultripes genome assembly, chromosome: 01.
OW240912.1:395677615-395677634
TAATTAATTTGGCACCACAACAATAACTCT395677615AAAATCCAGTTTTCCACCTCTTTTAGGTGTAACCCTTACAATTAGTTTGA
Pelophylax lessonae genome assembly, chromosome: 11.
OZ221985.1:206035130-206035149
CCCAAAAAGAAAAAAAAAAAGATTAAAAAA206035130AAAATCCAGTTTTCCACCTCGTTGGGGGTGGTGCCGGTGCGTGCATCAGT
Spinus spinus genome assembly, chromosome: 1.
OZ228748.1:145924994-145925013
AAGCTTGAAATCAGGTTCTTAGGTTCTCAA145924994AAAATCCAGTTTTCCACCTCTCCCTGTGCAAGCTGGAAAGTGTCCCTGCC
Karpatiosorbus bristoliensis genome assembly, chromosome: 17C.
OZ287421.1:5774268-5774287
GAGAGGGAGAGAGAGAGAGAGAGAGAGAGA5774268GAGGTGGAAAACTGGATTTTTTGGAATCCCTCTTCTCTCTTTCTTATTTG
Karpatiosorbus bristoliensis genome assembly, chromosome: 17A.
OZ287473.1:5539115-5539134
GGGAGAGAGAGAGAGAGAGAGAGAGAGAGA5539115GAGGTGGAAAACTGGATTTTTTGGAATCCCTCTTCTCTCTTTCTTATTTG
Karpatiosorbus bristoliensis genome assembly, chromosome: 17B.
OZ287474.1:6181927-6181946
AGGGGGGAGGGAGAGGGAGAGAGAGAGAGA6181927GAGGTGGAAAACTGGATTTTTTGGAATCCCTCTTCTCTCTTTCTTATTTG
Monacha cantiana genome assembly, chromosome: 15.
OZ180201.1:18362088-18362107
GGTTACAAAGACCTCAATACAAAAGGAGAA18362088GAGGTGGAAAACTGGATTTTCAGCAAGAGCCTGGTTCTCATAAATAAGCC
Scyllarides latus genome assembly, chromosome: 1.
OZ282080.1:232429949-232429968
AGTGTCAAGTGAAAAATTTAACGAGGTCTT232429949GAGGTGGAAAACTGGATTTTTTTATATAGTTATCAAACACATCAGGTGCA
Scyllarides latus genome assembly, chromosome: 1.
OZ282197.1:227194174-227194193
AGTGTCAAGTGAAAAATTTAACGAGGTCTT227194174GAGGTGGAAAACTGGATTTTTTTATATAGTTATCAAACACATCAGGTGCA
Chaetocnema hortensis genome assembly, chromosome: 4.
OZ289129.1:2382128-2382147
TTTCAAAAAAGGAACTTTTTTTTTCTAAAT2382128GAGGTGGAAAACTGGATTTTTGACGTGATTTGACAAAACTCACCGCAGTA
Myripristis murdjan genome assembly, chromosome: 22.
LR597571.1:8061027-8061046
GGCTCTCCAGCTTCCCTCATTTAACCTCCC8061027GAGGTGGAAAACTGGATTTTTCTTTCTGGGCTTCAGCTCATTTTCAGACA
Pelophylax lessonae genome assembly, chromosome: 5.
OZ221979.1:299839368-299839387
AGGTCCTGGGGAAAGTGAGGAAAGGGAAAG299839368GAGGTGGAAAACTGGATTTTTTGGGTACCAGAAATTGAAAATACAAGAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/aaaatccagttttccacctc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : aaaatccagttttccacctc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.468 | 0.459 | search_plus_done; http://172.18.8.135:50900/match?q=AAAATCCAGTTTTCCACCTC&k=0&no_gap=0&offset=0&limit=50
0.961 | 0.493 | search_minus_done; http://172.18.8.135:50900/match?q=GAGGTGGAAAACTGGATTTT&k=0&no_gap=0&offset=0&limit=21
0.967 | 0.006 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).