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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:14:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

BOT01-97K22TR BOT01 Brassica oleracea genomic clone BOT01-97K22, genomic survey sequence.
FI744883.1:324-346
ATTTGATATTAATCTTGTTTACTTTTGTAG324AACCTGTCATTTTGGAACGCCAAAGAAGAGAGTTTTGACATTTTTTTTTTTTG
BOT01-96L11TF BOT01 Brassica oleracea genomic clone BOT01-96L11, genomic survey sequence.
FI748524.1:324-346
ATTTGATATTAATCTTGTTTACTTTTGTAG324AACCTGTCATTTTGGAACGCCAAAGAAGAGAGTTTTGACATTTTTTTTTTTTG
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:380117-380139
ATTTGATATTAATCTTGTTTACTTTTGTAG380117AACCTGTCATTTTGGAACGCCAAAGAAGAGAGTTTTGACATTTTTTTTTTTGA
Brassica napus genome assembly, chromosome: C08.
HG994372.1:41291267-41291289
TCAAAAAAAAAAATGTCAAAACTCTCTTCT41291267TTGGCGTTCCAAAATGACAGGTTCTACAAAAGTAAACAAGATTAATATCAAAT
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50549088-50549110
GAAACAAAAAAAATGTCAAAACTCTCTTCT50549088TTGGCGTTCCAAAATGACAGGTTCTACAAAAGTAAACAAGATTAATATCAAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/aacctgtcattttggaacgccaa
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : aacctgtcattttggaacgccaa | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.166 | 0.157 | search_plus_done; http://172.18.8.135:50400/match?q=AACCTGTCATTTTGGAACGCCAA&k=0&no_gap=0&offset=0&limit=50
0.203 | 0.037 | search_minus_done; http://172.18.8.135:50400/match?q=TTGGCGTTCCAAAATGACAGGTT&k=0&no_gap=0&offset=0&limit=47
0.204 | 0.001 | cgi_end;

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