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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:08:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

BOT01-19M21TR BOT01 Brassica oleracea genomic clone BOT01-19M21, genomic survey sequence.
FI687983.1:114-134
AGAAGCCTTCTTCTTCTTTGAAGAAGAAAA114AGAAGATCCGCCGTGTTTAGCAACGCTGCTCAGCTTTTTGTCGTCGCTCTG
Brassica napus genome assembly, chromosome: C08.
HG994372.1:41587324-41587344
AGAAGCCTTCTTCTTCTTTGAAGAAGAAAA41587324AGAAGATCCGCCGTGTTTAGCAACGCTGCTCAGCTTTTTGTCGTCGCTCTG
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50825088-50825108
AGAAGCCTTCTTCTTCTTTGAAGAAGAAAA50825088AGAAGATCCGCCGTGTTTAGCAACGCTGCTCAGCTTTTTGTCGTCGCTCTG
94-E023032-021-019-L23-frev ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022L2319Q, mRNA sequence.
CX187798.1:202-222
CAGAGCGACGACAAAAAGCTGAGCAGCGTT202GCTAAACACGGCGGATCTTCTTTTTCTTCTTCAAAGAAGAAGAAGGCTTCT
BNSCS5CT_UP_173_A10_01JUN2007_080 Brassica napus BNSCS5CT Brassica napus cDNA 5', mRNA sequence.
EV090331.1:217-237
CAGAGCGACGACAAAAAGCTGAGCAGCGTT217GCTAAACACGGCGGATCTTCTTTTTCTTCTTCAAAGAAGAAGAAGGCTTCT
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:71610-71630
CAGAGCGACGACAAAAAGCTGAGCAGCGTT71610GCTAAACACGGCGGATCTTCTTTTTCTTCTTCAAAGAAGAAGAAGGCTTCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/agaagatccgccgtgtttagc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : agaagatccgccgtgtttagc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.235 | 0.226 | search_plus_done; http://172.18.8.135:50400/match?q=AGAAGATCCGCCGTGTTTAGC&k=0&no_gap=0&offset=0&limit=50
0.405 | 0.171 | search_minus_done; http://172.18.8.135:50400/match?q=GCTAAACACGGCGGATCTTCT&k=0&no_gap=0&offset=0&limit=47
0.408 | 0.002 | cgi_end;

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