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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:22:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:2753463-2753482
GTCTTCGTGACTATCTTTCTCTCTTTTTCT2753463ATGTCGATGTCGCTCTGTTGGGGAAACGGAAAACTAATCCTTCTAGAGAG
Stenoptilia bipunctidactyla genome assembly, chromosome: 1.
OX101722.1:31339924-31339943
GGAATAAATTGACGAAGTGGGGGTTCCAAG31339924ATGTCGATGTCGCTCTGTTGAATGAAACGAGGTGGAAAACAATCGACTCA
010512AAWA002106HT (AAWA) Royal Gala 59 DAFB seeds Malus domestica cDNA clone AAWA002106, mRNA sequence.
EB132889.1:42-61
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC42CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
TSA: Pyrus x bretschneideri Unigene69360_XinShao mRNA sequence.
JR655848.1:45-64
CTCTCTAGAAGGATTAGTTATCCGTTTCCC45CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGAGAGTCACGAAGAC
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:6109032-6109051
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC6109032CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:5830964-5830983
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC5830964CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:6050423-6050442
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC6050423CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:6023283-6023302
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC6023283CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:5901012-5901031
CTCTCTAGAAGGATTAGTTTTCCTTTTCCC5901012CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGAGAGTCACGAAGAA
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:5788877-5788896
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC5788877CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus domestica genome assembly, chromosome: 10.
OU696686.1:6073434-6073453
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC6073434CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus domestica genome assembly, chromosome: 10.
OU744551.1:5930769-5930788
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC5930769CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus domestica genome assembly, chromosome: 10.
OU744962.1:5956745-5956764
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC5956745CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus domestica genome assembly, chromosome: 10.
OU745000.1:5511302-5511321
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC5511302CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:5531931-5531950
CTCTCTAGAAGGATTAGTTTTCCGTTTCCC5531931CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGATAGTCACGAAGAC
Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:8127008-8127027
CTCTCTAAAAGGATTAGTTTTCCGTTTCCC8127008CAACAGAGCGACATCGACATAGAAAGCAGAGAAAGAGAGTCGCGCAGACA
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:3446940-3446959
CTCTCTAGAAGGATTAGTTATCCGTTTCCC3446940CAACAGAGCGACATCGACATAGAAAAAGAGAGAAAGAGAGTCACGAAGAC
Helleia helle genome assembly, chromosome: 6.
OY971419.1:17894125-17894144
GTGCGTCAAACTTGCGGCTGAATCCTCGGC17894125CAACAGAGCGACATCGACATCTATTTGATTTTGCAACGTCTTACTAAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/atgtcgatgtcgctctgttg
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : atgtcgatgtcgctctgttg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.316 | 0.307 | search_plus_done; http://172.18.8.135:50400/match?q=ATGTCGATGTCGCTCTGTTG&k=0&no_gap=0&offset=0&limit=50
0.462 | 0.147 | search_minus_done; http://172.18.8.135:50400/match?q=CAACAGAGCGACATCGACAT&k=0&no_gap=0&offset=0&limit=48
0.473 | 0.011 | cgi_end;

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