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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:03:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EST0045 Habanero leaf cDNA Capsicum chinense cDNA clone Jn 31 similar to Unknown protein, mRNA sequence.
BI480592.1:105-128
CCTTTTGGTCTGATTCAAACTCGAACACTC105CAAGATCCCCTAAACCAGAAAGTAGAGTTCATTTTCAGAAACTTGACACAAAAG
KS12018F09 KS12 Capsicum annuum cDNA, mRNA sequence.
CA523131.1:362-385
CCTTTTGGTCTGATTCAAACTCGAACACTC362CAAGATCCCCTAAACCAGAAAGTAGAGTTCATTTTCAGAAACTTGANACAAAAG
KS21010N23 KS21 Capsicum annuum cDNA, mRNA sequence.
GD100158.1:230-253
CCTTTTGGTCTGATTCAAACTCGAACACTC230CAAGATCCCCTAAACCAGAAAGTAGAGTTCATTTTCAGAAACTTGACACAAAAG
TSA: Physalis peruviana Php00a06458.16411 mRNA sequence.
JO140483.1:727-750
CCTTTTGGTCTGATTCAAACTCCAACACTC727CAAGATCCCCTAAACCAGAAAGTAGAGTACTTCATTTCAAGAAACTTGACACAA
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:30713630-30713653
CCTTTTGGTCTGATTCAAACTCGAACACTC30713630CAAGATCCCCTAAACCAGAAAGTAGAGTTCATTTTCAGAAACTTGACACAAAAG
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 9.
CP124711.1:11652608-11652631
CCTTTTGGTCTGATTCAAACTCAAACACCC11652608CAAGATCCCCTAAACCAGAAAGTAGAGTTCATTTTCAGAAACTTGACACAAAAG
TSA: Capsicum annuum MGMT_Contig33235 mRNA sequence.
JW083479.1:1111-1134
CTTTTGTGTCAAGTTTCTGAAAATGAACTC1111TACTTTCTGGTTTAGGGGATCTTGGAGTGTTCGAGTTTGAATCAGACCAAAAGG
TSA: Capsicum annuum EJVs_8204, mRNA sequence.
JW141050.1:538-561
CTTTTGTGTCAAGTTTCTGAAAATGAACTC538TACTTTCTGGTTTAGGGGATCTTGGAGTGTTCGAGTTTGAATCAGACCAAAAGG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:261865269-261865292
CTTTTGTGTCAAGTTTCTGAAAATGAACTC261865269TACTTTCTGGTTTAGGGGATCTTGGAGTGTTCGAGTTTGAATCAGACCAAAAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/caagatcccctaaaccagaaagta
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : caagatcccctaaaccagaaagta | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.222 | 0.213 | search_plus_done; http://172.18.8.135:50400/match?q=CAAGATCCCCTAAACCAGAAAGTA&k=0&no_gap=0&offset=0&limit=50
0.282 | 0.060 | search_minus_done; http://172.18.8.135:50400/match?q=TACTTTCTGGTTTAGGGGATCTTG&k=0&no_gap=0&offset=0&limit=44
0.284 | 0.002 | cgi_end;

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