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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:48:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

KS07010B07 KS07 Capsicum annuum cDNA, mRNA sequence.
BM066038.1:145-168
GGGTTGACATGGGTGAGCCCATTCTGAAGG145CATCAGATGTGCCCACTAAACTACCCCCTAATAGAGATCAATCTGTTGTTAAAG
Solanum melongena mRNA, clone: SmFL33E20, 5'end.
FS088968.1:671-694
AGGTTGACATGGGTGAGCCCATTCTGAAGG671CATCAGATGTGCCCACTAAACTACCCCCTAATAGAGATCAATCTGTCGTTAAAT
TSA: Capsicum annuum MGMT_Contig18589, mRNA sequence.
JW068833.1:727-750
GGGTTGACATGGGTGAGCCCATTCTGAAGG727CATCAGATGTGCCCACTAAACTACCCCCTAATAGAGATCAATCTGTTGTTAAAG
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 6.
CP124714.1:154043744-154043767
AGGGTTGATATGGGTGAGCCCTTCTGAAGG154043744CATCAGATGTGCCCACTAAACTACCCCCTTATAGAGATCAATCTGTCTTTAAAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:256685838-256685861
GGGTTGACATGGGTGAGCCCATTCTGAAGG256685838CATCAGATGTGCCCACTAAACTACCCCCTAATAGAGATCAATCTGTTGTTAAAG
KS07001H10 KS07 Capsicum annuum cDNA, mRNA sequence.
BM065285.1:518-541
CTTTAACAACAGATTGATCTCTATTAGGGG518GTAGTTTAGTGGGCACATCTGATGCCTTCAGAATGGGCTCACCCATGTCAACCC
Capsicum annuum Takanotsume DNA, chromosome 9, sequence.
AP026704.1:12305499-12305522
CTTTAACAACAGATTGATCTCTATTAGGGG12305499GTAGTTTAGTGGGCACATCTGATGCCTTCAGAATGGGCTCACCCATGTCAACCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/catcagatgtgcccactaaactac
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : catcagatgtgcccactaaactac | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.207 | 0.199 | search_plus_done; http://172.18.8.135:50400/match?q=CATCAGATGTGCCCACTAAACTAC&k=0&no_gap=0&offset=0&limit=50
0.247 | 0.040 | search_minus_done; http://172.18.8.135:50400/match?q=GTAGTTTAGTGGGCACATCTGATG&k=0&no_gap=0&offset=0&limit=45
0.249 | 0.002 | cgi_end;

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