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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:46:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Ipomoea nil cDNA clone:jmsf32m13, 5' end.
CJ745809.1:136-159
CTTTTTGTAGCCCACAGCACACCTCCCTGG136CCCCATCCCCCAATATACACTTCTTTGAGTGATTTCTTGAAGAAAAATTGGGTC
Ipomoea nil mRNA, clone: JMFS058D10, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY940449.1:276-299
CTTTTTGTAGCCCACAGCACACCTCCCTGG276CCCCATCCCCCAATATACACTTCTTTGAGTGATTTCTTGAAGAAAAATTGGGTC
Ipomoea nil mRNA, clone: JMFS154H03, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY947885.1:310-333
CTTTTTGTAGCCCACAGCACACCTCCCTGG310CCCCATCCCCCAATATACACTTCTTTGAGTGATTTCTTGAAGAAAAATTGGGTC
Ipomoea trifida cultivar NCNSP0306 chromosome 9.
CP025652.1:6927380-6927403
CTTTTTGTAGCCCACACCACACCTCCCAGG6927380CCCCATCCCCCAATATACACTTCTTTGAAGAAAAAAAGGTGGTCTTGGAGTGTT
Ipomoea triloba cultivar NCNSP0323 chromosome 9.
CP025668.1:8289542-8289565
CTTTTTGTAGCCCACACCACACCTCCCAGG8289542CCCCATCCCCCAATATACACTTCTTTGAAGAAAAAAGGTGGTGTTGGAGTGATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ccccatcccccaatatacacttct
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ccccatcccccaatatacacttct | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.364 | 0.355 | search_plus_done; http://172.18.8.135:50400/match?q=CCCCATCCCCCAATATACACTTCT&k=0&no_gap=0&offset=0&limit=50
0.440 | 0.077 | search_minus_done; http://172.18.8.135:50400/match?q=AGAAGTGTATATTGGGGGATGGGG&k=0&no_gap=0&offset=0&limit=45
0.440 | 0.000 | cgi_end;

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