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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 11:55:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Capsicum annuum MGMT_Contig8887, mRNA sequence.
JW059131.1:1042-1065
CAAAAGAGAACCACAAGCAGAAATGGTCAC1042CTTGGCCTCAATACATATCCTCTTAGTGATATCTTTATTCAAACTACTTGCAAT
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:19296985-19297008
CAAAAGAGAACCACAAGCAGAAATGGTCAC19296985CTTGGCCTCAATACATATCCTCTTAGTGATATCTTTATTCAAACTACTTGCAAT
KR3B.109I17F.051111T7 KR3B Nicotiana tabacum cDNA clone KR3B.109I17, mRNA sequence.
DW004719.1:268-291
ATTGCAACTAGTACAAATAAAGATATCACA268AAGAGGATATGTATTGAGGCCAAGGTAACCATATCAGCTTGTGGCTCTCTTTTG
Petunia axillaris subsp. axillaris EST, clone dr004P0003E11_F.ab1 2007-08-10.
FN007720.1:301-324
CTTGCAACTAGTATGAATAAAGATATCACA301AAGAGGATATGTATTGAGGCCAAGGTGACCCTTTCAGCTTGTGGTTCACTTTTG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:273438227-273438250
ATTGCAAGTAGTTTGAATAAAGATATCACT273438227AAGAGGATATGTATTGAGGCCAAGGTGACCATTTCTGCTTGTGGTTCTCTTTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/cttggcctcaatacatatcctctt
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : cttggcctcaatacatatcctctt | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.189 | 0.180 | search_plus_done; http://172.18.8.135:50400/match?q=CTTGGCCTCAATACATATCCTCTT&k=0&no_gap=0&offset=0&limit=50
0.394 | 0.204 | search_minus_done; http://172.18.8.135:50400/match?q=AAGAGGATATGTATTGAGGCCAAG&k=0&no_gap=0&offset=0&limit=48
0.396 | 0.002 | cgi_end;

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