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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 11:54:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

KS21029A16 KS21 Capsicum annuum cDNA, mRNA sequence.
GD101827.1:195-218
GCCTCTCCTCTTTCCACGAGGGCTGAAGTA195GAGGGGGTAGATAACAGTAGCAAGCCTGAAAGTGGAAGTGCTAAATTAGCCAAT
KS25003A16 KS25 Capsicum annuum cDNA, mRNA sequence.
GD124080.1:66-89
GCCTCTCCTCTTTCCACGAGGGCTGAAGTA66GAGGGGGTAGATAACAGTAGCAAGCCTGAAAGTGGAAGTGCTAAATTAGCCAAT
TSA: Capsicum annuum MGMT_Contig15034, mRNA sequence.
JW065278.1:2487-2510
GCCTCTCCTCTTTCCACGAGGGCTGAAGTA2487GAGGGGGTAGATAACAGTAGCAAGCCTGAAAGTGGAAGTGCTAAATTAGCCAAT
TSA: Capsicum annuum MGMT_Contig44113 mRNA sequence.
JW094357.1:1844-1867
GCCTCTCCTCTTTCCACGAGGGCTGAAGTA1844GAGGGGGTAGATAACAGTAGCAAGCCTGAAAGTGGAAGTGCTAAATTAGCCAAT
TSA: Capsicum annuum CM_MegaContig_27655 mRNA sequence.
JW104768.1:1914-1937
GCCTCTCCTCTTTCCACGAGGGCTGAAGTA1914GAGGGGGTAGATAACAGTAGCAAGCCTGAAAGTGGAAGTGCTAAATTAGCCAAT
KS23009B12 KS23 Capsicum annuum cDNA, mRNA sequence.
GD111788.1:588-611
ATTGGCTAATTTAGCACTTCCACTTTCAGG588CTTGCTACTGTTATCTACCCCCTCTACTTCAGCCCTCGTGG
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 1.
CP124719.1:131244348-131244371
ATCGGCTAATTTAGCACTTCCACCTTCAGG131244348CTTGCTACTGTTATCTACCCCCTCTACTTCAGCCCTCGTGGAGAGAGGAGAGGC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 8.
CP124724.1:157007416-157007439
ATTGGCTAATTTAGCACTTCCACTTTCAGG157007416CTTGCTACTGTTATCTACCCCCTCTACTTCAGCCCTCGTGGAAAGAGGAGAGGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/gagggggtagataacagtagcaag
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : gagggggtagataacagtagcaag | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.381 | 0.372 | search_plus_done; http://172.18.8.135:50400/match?q=GAGGGGGTAGATAACAGTAGCAAG&k=0&no_gap=0&offset=0&limit=50
0.586 | 0.206 | search_minus_done; http://172.18.8.135:50400/match?q=CTTGCTACTGTTATCTACCCCCTC&k=0&no_gap=0&offset=0&limit=45
0.589 | 0.002 | cgi_end;

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