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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:25:55, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Lactuca sativa Letassy_X1_1191 mRNA sequence.
JI577574.1:922-945
ACCATCTCTTCGTACCTCTCGGCTTGCTCC922GCAAGCTTCGCCATGTACACATACTGCTCTCTCGTTAAATTTTCCGGCATGGTG
TSA: Lactuca serriola Serrassy_T_P2_41091 mRNA sequence.
JO024361.1:922-945
ACCATCTCTTCGTACCTCTCGGCTTGCTCC922GCAAGCTTCGCCATGTACACATACTGCTCTCTCGTTAAATTTTCCGGCATGGTG
BH_PBa029I11.F BH_PBa Boechera holboellii genomic 5', genomic survey sequence.
KS402999.1:805-828
ACCATCTCTTCGTAACGCTCCGCCTGCTCG805GCAAGCTTCGCCATGTACACATACTGGTCTCTGCCTAATGTCCCCGCCATTAAA
Lactuca saligna genome assembly, chromosome: 9.
OX465085.1:86398257-86398280
ACCATCTCTTCGTACCTCTCGGCTTGCTCC86398257GCAAGCTTCGCCATGTACACATACTGCTCTCTCGTTAAATTTTCCGGCATGGTG
Sequence 12872 from patent US 8030546.
GY465097.1:35-58
CACCATGCCGGAGAATTTAACGAGAGAGCA35GTATGTGTACATGGCGAAGCTTGCGGAGCAAGCCGAGAGGTACGAAGAGATGGT
Sequence 12872 from patent US 10597667.
MO976250.1:35-58
CACCATGCCGGAGAATTTAACGAGAGAGCA35GTATGTGTACATGGCGAAGCTTGCGGAGCAAGCCGAGAGGTACGAAGAGATGGT
Ipomoea nil cDNA clone:jm16l10, 5' end, single read.
BJ555279.1:90-113
CTCTGTGACAATGGCGTCGACACGCGAGGA90GTATGTGTACATGGCGAAGCTTGCGGAGCAGGCGGAACGCTACGAGGAGATGGT
Ipomoea nil cDNA clone:jm37j04, 5' end, single read.
BJ562656.1:128-151
CTCTGTGACAATGGCGTCGACACGCGAGGA128GTATGTGTACATGGCGAAGCTTGCGGAGCAGGCGGAACGCTACGAGGAGATGGT
Ipomoea nil cDNA clone:jm38m05, 5' end, single read.
BJ563022.1:128-151
CTCTGTGACAATGGCGTCNACACGCGAGGA128GTATGTGTACATGGCGAAGCTTGCGGAGCAGGCGGAACGCTACGANGAGATGGT
Arabidopsis thaliana cDNA clone:RAFL22-77-C18, 5' end.
BP827928.1:66-89
CTCTAATGGCGGCGACATTAGGCAGAGACA66GTATGTGTACATGGCGAAGCTTGCCGAGCAGGCGGAGCGTTACGAAGAGATGGT
QGJ14I07.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGJ14I07, mRNA sequence.
BU010806.1:7-30
AGAGCA7GTATGTGTACATGGCGAAGCTTGCGGAGCAAGCCGAGAGGTACGAAGAGATGGT
QGJ5C14.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGJ5C14, mRNA sequence.
BU013625.1:7-30
AGAGCA7GTATGTGTACATGGCGAAGCTTGCGGAGCAAGCCGAGAGGTACGAAGAGATGGT
CLLY13041.b1_B22.ab1 CLL(XYZ) lettuce saligna Lactuca saligna cDNA clone CLLY13041, mRNA sequence.
DW060527.1:18-41
TTCGCGGGGAGAGAGGA18GTATGTGTACATGGCGAAGCTTGCGGAGCAAGCCGAGAGGTACGAAGAGATGGT
CLLY13870.b1_K11.ab1 CLL(XYZ) lettuce saligna Lactuca saligna cDNA clone CLLY13870, mRNA sequence.
DW061422.1:1-24
1GTATGTGTACATGGCGAAGCTTGCGGAGCAAGCCGAGAGGTACGAAGAGATGGT
CLPX4117.b1_I22.ab1 CLP(XYZ) lettuce perennis Lactuca perennis cDNA clone CLPX4117, mRNA sequence.
DW081220.1:77-100
CACCATGCCGGAAAATCTAACTAGAGAGCA77GTATGTGTACATGGCGAAGCTTGCGGAACAAGCCGAGAGGTACGAAGAGATGGT
CLPX6464.b1_P08.ab1 CLP(XYZ) lettuce perennis Lactuca perennis cDNA clone CLPX6464, mRNA sequence.
DW083735.1:76-99
CACCATGCCGGAAAATCTAACTAGAGAGCA76GTATGTGTACATGGCGAAGCTTGCGGAACAAGCCGAGAGGTACGAAGAGATGGT
CLPY2102.b1_L21.ab1 CLP(XYZ) lettuce perennis Lactuca perennis cDNA clone CLPY2102, mRNA sequence.
DW090838.1:88-111
CACCATGCCGGAAAATCTAACTAGAGAGCA88GTATGTGTACATGGCGAAGCTTGCGGAACAAGCCGAGAGGTACGAAGAGATGGT
CLPY8389.b1_J10.ab1 CLP(XYZ) lettuce perennis Lactuca perennis cDNA clone CLPY8389, mRNA sequence.
DW097366.1:83-106
CACCATGCCGCACTTACTAACTAGAGAGCA83GTATGTGTACATGGCGAAGCTTGCGGAACAAGCCGAGAGGTACGAAGAGATGGT
CLRX7052.b1_H11.ab1 CLR(XYZ) lettuce serriola Lactuca serriola cDNA clone CLRX7052, mRNA sequence.
DW110017.1:46-69
CACCATGCCGGAAAATTTAACGAGAGAGCA46GTATGTGTACATGGCGAAGCTTGCGGAGCAAGCCGAGAGGTACGAAGAGATGGT
CLSX5797.b1_I09.ab1 CLS(XYZ) lettuce sativa Lactuca sativa cDNA clone CLSX5797, mRNA sequence.
DW128995.1:35-58
CACCATGCCGGAGAATTTAACGAGAGAGCA35GTATGTGTACATGGCGAAGCTTGCGGAGCAAGCCGAGAGGTACGAAGAGATGGT
CLVY14513.b1_B06.ab1 CLV(XYZ) lettuce virosa Lactuca virosa cDNA clone CLVY14513, mRNA sequence.
DW162571.1:52-75
CACCATGCCGGAAAATTTAACGAGAGAGCA52GTATGTGTACATGGCGAAGCTTGCGGAGCAAGCCGAGAGGTACGAAGAGATGGT
CLVY6789.b1_I18.ab1 CLV(XYZ) lettuce virosa Lactuca virosa cDNA clone CLVY6789, mRNA sequence.
DW168435.1:447-470
CACCATGCCGGAAAATTTAACGAGAGAGCA447GTATGTGTACATGGCGAAGCTTGCGGAGCAAGCCGAGAGGTACGAAGAGATGGT
CLSS2830.b1_L11.ab1 CLS(LMS) lettuce sativa Lactuca sativa cDNA clone CLSS2830, mRNA sequence.
DY980843.1:72-95
CACCATGCCGGAAAATTTAACGAGAGAGCA72GTATGTGTACATGGCGAAGCTTGCGGAGCAAGCCGAGAGGTACGAAGAGATGGT
CLSS4477.b2_I16.ab1 CLS(LMS) lettuce sativa Lactuca sativa cDNA clone CLSS4477, mRNA sequence.
DY982487.1:64-87
CACCATGCCGGAAAATTTAACGAGAGAGCA64GTATGTGTACATGGCGAAGCTTGCGGAGCAAGCCGAGAGGTACGAAGAGATGGT
CCPW15525.b1_J17.ab1 CCP(UWX) Globe Artichoke Cynara cardunculus var. scolymus cDNA clone CCPW15525, mRNA sequence.
GE591570.1:71-94
CACCGTGCCGGAGAATCTCACAAGAGAGCA71GTATGTGTACATGGCGAAGCTTGCGGAACAAGCCGAACGCTACGAAGAGATGGT
CCPW15717.b1_J18.ab1 CCP(UWX) Globe Artichoke Cynara cardunculus var. scolymus cDNA clone CCPW15717, mRNA sequence.
GE591775.1:67-90
CACCGTGCCGGAGAATCTCACAAGAGAGCA67GTATGTGTACATGGCGAAGCTTGCGGAACAAGCCGAACGCTACGAAGAGATGGT
CCPW9376.b1_P15.ab1 CCP(UWX) Globe Artichoke Cynara cardunculus var. scolymus cDNA clone CCPW9376, mRNA sequence.
GE601071.1:90-113
CACCGTGCCGGAGAATCTCACAAGAGAGCA90GTATGTGTACATGGCGAAGCTTGCGGAACAAGCCGAACGCTACGAAGAGATGGT
CCPX10458.b1_C23.ab1 CCP(UWX) Globe Artichoke Cynara cardunculus var. scolymus cDNA clone CCPX10458, mRNA sequence.
GE602237.1:80-103
CACCGTGCCGGAGAATCTCACAAGAGAGCA80GTATGTGTACATGGCGAAGCTTGCGGAACAAGCCGAACGCTACGAAGAGATGGT
CCPX12082.b1_D21.ab1 CCP(UWX) Globe Artichoke Cynara cardunculus var. scolymus cDNA clone CCPX12082, mRNA sequence.
GE603977.1:79-102
CACCGTGCCGGAGAATCTCACAAGAGAGCA79GTATGTGTACATGGCGAAGCTTGCGGAACAAGCCGAACGCTACGAAGAGATGGT
CCPX3259.b1_F23.ab1 CCP(UWX) Globe Artichoke Cynara cardunculus var. scolymus cDNA clone CCPX3259, mRNA sequence.
GE606174.1:90-113
CACCGTGCCGGAGAATCTCACAAGAGAGCA90GTATGTGTACATGGCGAAGCTTGCGGAACAAGCCGAACGCTACGAAGAGATGGT
Ipomoea nil mRNA, clone: jm42j24, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY923552.1:112-135
CTCTGTGACAATGGCGTCGACACGCGAGGA112GTATGTGTACATGGCGAAGCTTGCGGAGCAGGCGGAACGCTACGAGGAGATGGT
Ipomoea nil mRNA, clone: jm43o15, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY924032.1:128-151
CTCTGTGACAATGGCGTCGACACGCGAGGA128GTATGTGTACATGGCGAAGCTTGCGGAGCAGGCGGAACGCTACGAGGAGATGGT
Ipomoea nil mRNA, clone: jm46f09, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY924932.1:65-88
CTCTGTGACAATGGCGTCGACACGCGAGGA65GTATGTGTACATGGCGAAGCTTGCGGAGCAGGCGGAACGCTACGAGGAGATGGT
TSA: Saussurea involucrata Unigene54073_SAUriwTARAAPEI-1, mRNA sequence.
JW881842.1:85-108
CCCCGTGCCGGACAATCTAACAAGAGAGCA85GTATGTGTACATGGCGAAGCTTGCGGAGCAAGCCGAACGCTACGAAGAGATGGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/gcaagcttcgccatgtacacatac
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : gcaagcttcgccatgtacacatac | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.227 | 0.219 | search_plus_done; http://172.18.8.135:50400/match?q=GCAAGCTTCGCCATGTACACATAC&k=0&no_gap=0&offset=0&limit=50
2.047 | 1.820 | search_minus_done; http://172.18.8.135:50400/match?q=GTATGTGTACATGGCGAAGCTTGC&k=0&no_gap=0&offset=0&limit=46
2.067 | 0.020 | cgi_end;

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