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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:11:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

JH02019B11 JH-201 Capsicum annuum cDNA 5', mRNA sequence.
CO776824.1:411-435
GTTTTTGATGGTCATGGTGGTTCAAGAACA411GCAGAATACCTAAAGAACAACCTCTTTAAGAATTTGAGTAGTCATCCTGATTTTA
Solanum melongena mRNA, clone: SmFL09K20, 5'end.
FS072598.1:472-496
GTTTTTGATGGTCATGGTGGTTCAAGAACA472GCAGAATACCTAAAGAACAACCTCTTTAAGAATTTGAGCAGTCATCCTGATTTTA
Solanum melongena mRNA, clone: SmFL15H11, 5'end.
FS076675.1:476-500
GTTTTTGATGGTCATGGTGGTTCAAGAACA476GCAGAATACCTAAAGAACAACCTCTTTAAGAATTTGAGCAGTCATCCTGATTTTA
Solanum melongena mRNA, clone: SmFL15P13, 5'end.
FS077030.1:476-500
GTTTTTGATGGTCATGGTGGTTCAAGAACA476GCAGAATACCTAAAGAACAACCTCTTTAAGAATTTGAGCAGTCATCCTGATTTTA
KS20056H04 KS20 Capsicum annuum cDNA, mRNA sequence.
GD098517.1:54-78
GTTTTTGATGGTCATGGTGGTTCAAGAACA54GCAGAATACCTAAAGAACAACCTCTTTAAGAATTTGAGTAGTCATCCTGATTTTA
KS25010E05 KS25 Capsicum annuum cDNA, mRNA sequence.
GD124736.1:188-212
GTTTTTGATGGTCATGGTGGTTCAAGAACA188GCAGAATACCTAAAGAACAACCTCTTTAAGAATTTGAGTAGTCATCCTGATTTTA
KS25013P16 KS25 Capsicum annuum cDNA, mRNA sequence.
GD125067.1:416-440
GTTTTTGATGGTCATGGTGGTTCAAGAACA416GCAGAATACCTAAAGAACAACCTCTTTAAGAATTTGAGTAGTCATCCTGATTTTA
KS25035H15 KS25 Capsicum annuum cDNA, mRNA sequence.
GD126978.1:391-415
GTTTTTGATGGTCATGGTGGTTCAAGAACA391GCAGAATACCTAAAGAACAACCTCTTTAAGAATTTGAGTAGTCATCCTGATTTTA
KS25052F01 KS25 Capsicum annuum cDNA, mRNA sequence.
GD128515.1:188-212
GTTTTTGATGGTCATGGTGGTTCAAGAACA188GCAGAATACCTAAAGAACAACCTCTTTAAGAATTTGAGTAGTCATCCTGATTTTA
TSA: Capsicum annuum MA_MegaContig_32955, mRNA sequence.
JW160587.1:562-586
GTTTTTGATGGTCATGGTGGTTCAAGAACA562GCAGAATACCTAAAGAACAACCTCTTTAAGAATTTGAGTAGTCATCCTGATTTTA
Capsicum annuum Takanotsume DNA, chromosome 4, sequence.
AP026699.1:185276716-185276740
TTGGCATTAGGTCATGGTGGTTCAAGAACA185276716GCAGAATACCTAAAGAACAACCTCTTTAAGAATTTGAGTAGTCATCCTGATTTTA
TSA: Capsicum annuum MGMT_Contig19538, mRNA sequence.
JW069782.1:1446-1470
TAAAATCAGGATGACTACTCAAATTCTTAA1446AGAGGTTGTTCTTTAGGTATTCTGCTGTTCTTGAACCACCATGACCATCAAAAAC
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 12.
CP124708.1:3679681-3679705
TAAAATCAGGATGACTACTCAAATTCTTAA3679681AGAGGTTGTTCTTTAGGTATTCTGCTGTTCTTGAACCACCATGACCTAATACCAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 4.
CP124728.1:67729046-67729070
TAAAATCAGGATGACTACTCAAATTCTTAA67729046AGAGGTTGTTCTTTAGGTATTCTGCTGTTCTTGAACCACCATGACCTAATGCCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/gcagaatacctaaagaacaacctct
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : gcagaatacctaaagaacaacctct | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.909 | 0.901 | search_plus_done; http://172.18.8.135:50400/match?q=GCAGAATACCTAAAGAACAACCTCT&k=0&no_gap=0&offset=0&limit=50
1.050 | 0.141 | search_minus_done; http://172.18.8.135:50400/match?q=AGAGGTTGTTCTTTAGGTATTCTGC&k=0&no_gap=0&offset=0&limit=39
1.052 | 0.002 | cgi_end;

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