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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-10 16:46:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Nicotiana tabacum EST, clone nt006119070.
AM788966.1:337-360
ACCACAACCTGCAAACCAATTTGCCAAGGG337TAATCTTCAGGGACCAGATACACACAAGCAGGACCAAAAACCAACAATCCCAAG
CHO_OF311xp21r1.ab1 CHO_OF Nicotiana tabacum genomic 3', genomic survey sequence.
ET752414.1:127-150
ACCACAACCTGCAAACCAATTTGCCAAGGG127TAATCTTCAGGGACCAGATACACACAAGCAGGACCAAGAACCAACAATCCCAAG
CHO_OF7325xc05f1.ab1 CHO_OF7 Nicotiana tabacum genomic 5', genomic survey sequence.
FI071632.1:420-443
ACCACAACCTGCAAACCAATTTGCCAAGGG420TAATCTTCAGGGACCAGATACACACAAGCAGGACCAAGAACCAACAATCCCAAG
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:277192029-277192052
ACCACAACTTGCAAAGCAATTTGCCAAGGG277192029TAATCTTCAGGGACCAGATACACACAAGCAGGGCCAACAACCAGCAATGCCAAG
KR 1020160038243-A/89: Single nucleotide polymorphism marker set for marker-assisted breeding in Capsicum and uses thereof.
LG144796.1:82-105
CTTGGCATTGCTGGTTGTTGGCCCTGCTTG82TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGCT
Nicotiana tabacum EST, clone nt006073014.
AM817544.1:353-376
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG353TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGT
KS01073E06 KS01 Capsicum annuum cDNA, mRNA sequence.
BM064979.1:397-420
CTTGGCATTACTGGTTGTTGGCCCTGCTTG397TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGCTTTGCAAGTTGTGGT
KS04199T70 KS04 Capsicum chinense cDNA, mRNA sequence.
CB185082.1:340-363
CTTGGCATTGCTGGTTGTTGGCCCTGCTTG340TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGCTTTGCAAGTTGTGGT
KP1B.104K06F.050725T7 KP1B Nicotiana tabacum cDNA clone KP1B.104K06, mRNA sequence.
DV160939.1:441-464
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG441TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGT
KL4B.109E02F.051106T7 KL4B Nicotiana tabacum cDNA clone KL4B.109E02, mRNA sequence.
DW000883.1:484-507
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG484TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGT
KL5B.118E12F.060217T7 KL5B Nicotiana tabacum cDNA clone KL5B.118E12, mRNA sequence.
EB432596.1:447-470
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG447TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGT
BL12.100O08F.060308T7 BL12 Nicotiana tabacum cDNA clone BL12.100O08, mRNA sequence.
EB436289.1:37-60
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG37TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGT
KN6B.103N22F.060103T7 KN6B Nicotiana tabacum cDNA clone KN6B.103N22, mRNA sequence.
EB439563.1:488-511
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG488TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGT
KL4B.102L24F.051125T7 KL4B Nicotiana tabacum cDNA clone KL4B.102L24, mRNA sequence.
EB679969.1:495-518
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG495TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGT
KL4B.111H09F.060128T7 KL4B Nicotiana tabacum cDNA clone KL4B.111H09, mRNA sequence.
EB680815.1:487-510
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG487TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGT
KL4B.112L09F.060131T7 KL4B Nicotiana tabacum cDNA clone KL4B.112L09, mRNA sequence.
EB681205.1:487-510
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG487TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGT
TT-05_A15 K326 early senescent leaf library Nicotiana tabacum cDNA, mRNA sequence.
FG641877.1:405-428
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG405TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGT
Nicotiana tabacum cDNA, clone: TBK01A01NGRL0041_4_B08, 5'-end sequence.
FS387471.1:449-472
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG449TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGT
Nicotiana tabacum cDNA, clone: TBK02GR0036_3_H12, 5'-end sequence.
FS413971.1:449-472
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG449TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGT
Nicotiana tabacum cDNA, clone: TBK02GR0073_1_G06, 5'-end sequence.
FS427187.1:399-422
CTTGGGATTGTTGGGTCTTGGTCCTGCTTG399TGTGTATCTGGTCCCTGAAGATTACCCTTGGGAAATTGGGTTGCAGGTTGTGGG
Nicotiana tabacum cDNA, clone: TBK02GR0087_3_H02, 5'-end sequence.
FS432412.1:496-519
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG496TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTTGCAGGTTGTGG
NSYL11159 Nicotiana sylvestris normalized full-length cDNA Library Nicotiana sylvestris cDNA 5', mRNA sequence.
JZ951484.1:394-417
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG394TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGT
NTOM4437 Nicotiana tomentosiformis normalized full-length cDNA Library Nicotiana tomentosiformis cDNA 5', mRNA sequence.
JZ961634.1:471-494
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG471TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGT
TSA: Capsicum annuum MGMT_Contig38536 mRNA sequence.
JW088780.1:580-603
CTTGGCATTGCTGGTTGTTGGCCCTGCTTG580TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGCTTTGCAAGTTGTGGT
TSA: Nicotiana benthamiana isotig00744.Nb_leaf mRNA sequence.
KA737000.1:1354-1377
CTTGGGTTTGTTGGTTCTTGGTCCTGCTTG1354TGTGTATCTGGTCCCTGAAGATTATCCTTGGCAAATTGGTTTGCAGGTTGTGGT
TSA: Nicotiana benthamiana isotig00745.Nb_leaf mRNA sequence.
KA737001.1:1353-1376
CTTGGGTTTGTTGGTTCTTGGTCCTGCTTG1353TGTGTATCTGGTCCCTGAAGATTATCCTTGGCAAATTGGTTTGCAGGTTGTGGT
CHO_OF311xp21f1.ab1 CHO_OF Nicotiana tabacum genomic 5', genomic survey sequence.
ET752350.1:503-526
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG503TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGT
CHO_OF729xg06r1.ab1 CHO_OF Nicotiana tabacum genomic 3', genomic survey sequence.
ET818644.1:369-392
CTTGGGATTGTTGGTTCTTGGTCCTGCTTG369TGTGTATCTGGTCCCTGAAGATTACCCTTGGGAAATTG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:14591689-14591712
CTTGGCATTACTGGTTGTTGGCCCTGCTTG14591689TGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGCTTTGCAAGTTGTGGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/taatcttcagggaccagatacaca
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : taatcttcagggaccagatacaca | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.160 | 0.152 | search_plus_done; http://172.18.8.135:50400/match?q=TAATCTTCAGGGACCAGATACACA&k=0&no_gap=0&offset=0&limit=50
1.235 | 1.075 | search_minus_done; http://172.18.8.135:50400/match?q=TGTGTATCTGGTCCCTGAAGATTA&k=0&no_gap=0&offset=0&limit=46
1.251 | 0.016 | cgi_end;

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