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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 20:58:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Ipomoea nil DNA, BAC clone: JMHiBa-066M05, sequence: JMHiBa-066M05.g.
GA972917.1:590-613
GTTTCCGGCGGAGAACGCCGCGTTTCCTTT590TCCCTTAGCTTCGTCTGCCATAAGTCTCTTCCTATCTCTCTCTCTCTCTCTCTC
Ipomoea trifida cultivar NCNSP0306 chromosome 8.
CP025651.1:536024-536047
GTTTCCGGCGGAGAACGCCGCGTTTCCTTT536024TCCCTTAGCTTCGTCTGCCATAAGTCTCTTCTCCTCTCTCTCTCTCTCTATCTC
Ipomoea triloba cultivar NCNSP0323 chromosome 8.
CP025667.1:635314-635337
GTTTCCGGCGGAGAACGCCGCGTTTCCTTT635314TCCCTTAGCTTCGTCTGCCATAAGTCTCTTCTCCTCTCTCTCTCTCTATCTCTC
Ipomoea nil mRNA, clone: jm50n05, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY926555.1:12-35
ATAGGAAGAGA12CTTATGGCAGACGAAGCTAAGGGAAAAGGAAACGCGGCGTTCTCCGCCGGAAAC
Ipomoea nil mRNA, clone: JMFS026F05, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY937943.1:12-35
ATAGGAAGAGA12CTTATGGCAGACGAAGCTAAGGGAAAAGGAAACGCGGCGTTCTCCGCCGGAAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tcccttagcttcgtctgccataag
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tcccttagcttcgtctgccataag | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.186 | 0.178 | search_plus_done; http://172.18.8.135:50400/match?q=TCCCTTAGCTTCGTCTGCCATAAG&k=0&no_gap=0&offset=0&limit=50
0.444 | 0.257 | search_minus_done; http://172.18.8.135:50400/match?q=CTTATGGCAGACGAAGCTAAGGGA&k=0&no_gap=0&offset=0&limit=47
0.445 | 0.002 | cgi_end;

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