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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 04:27:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:114221-114242
GGTTTGAAAGATCAGAGTCTCAGTCTGAAT114221TGTCCAGTGGAACTTCGGATGCCTTAGCAATAGAGCAACGTCGAGCTTACAA
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_7191.
FX691751.1:3699-3720
TTGTAAGCTCGACGTTGCTCTATTGCTAAG3699GCATCCGAAGTTCCACTGGACAATTCAGACTGAGACTCTGATCTTTCAAACC
BOGDQ76TF BOGD Brassica oleracea genomic clone BOGDQ76, genomic survey sequence.
BH535197.1:55-76
TTGTAAGCTCGACGTTGCTCTATTGCTAAG55GCATCCGAAGTTCCACTGGACAATTCAGACTGAGACTCTGATCTTTCAAACC
BOT01-98F7TR BOT01 Brassica oleracea genomic clone BOT01-98F7, genomic survey sequence.
FI748401.1:592-613
TTGTAAGCTCGACGTTGCTCTATTGCTAAG592GCATCCGAAGTTCCACTGGACAATTCAGACTGAGACTCTGATCTTTCAAACC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' linkage group A10 clone KBrB119O22, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.
AC234732.1:80180-80201
TTGTAAGCTCGACGTTGCTCTATTGCTAAG80180GCATCCGAAGTTCCACTGGACAATTCAGACTGAGACTCTGATCTTTCAAACC
Brassica napus genome assembly, chromosome: C08.
HG994372.1:41562671-41562692
TTGTAAGCTCGACGTTGCTCTATTGCTAAG41562671GCATCCGAAGTTCCACTGGACAATTCAGACTGAGACTCTGATCTTTCAAACC
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50800433-50800454
TTGTAAGCTCGACGTTGCTCTATTGCTAAG50800433GCATCCGAAGTTCCACTGGACAATTCAGACTGAGACTCTGATCTTTCAAACC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tgtccagtggaacttcggatgc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tgtccagtggaacttcggatgc | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.386 | 0.378 | search_plus_done; http://172.18.8.135:50400/match?q=TGTCCAGTGGAACTTCGGATGC&k=0&no_gap=0&offset=0&limit=50
0.576 | 0.189 | search_minus_done; http://172.18.8.135:50400/match?q=GCATCCGAAGTTCCACTGGACA&k=0&no_gap=0&offset=0&limit=49
0.580 | 0.004 | cgi_end;

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