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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 13:02:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

KS13008F08 KS13 Capsicum annuum cDNA, mRNA sequence.
GD052774.1:73-97
TTCTCTCAATGGCGGCGGCGAGGATTGCAT73TGTTGAAATACCTAAGAGTCGAAGCTCGATCAGCTCAATTCCAAAACCCTAGAAT
TSA: Capsicum annuum CM_MegaContig_13425 mRNA sequence.
JW101087.1:86-110
TTCTCTCAATGGCGGCGGCGAGGATTGCAT86TGTTGAAATACCTAAGAGTCGAAGCTCGACCAGCTCAATTCCAAAACCCTAGAAT
TSA: Capsicum annuum EJ_MegaContig_29113, mRNA sequence.
JW135027.1:743-767
ATTCTAGGGTTTTGGAATTGAGCTGGTCGA743GCTTCGACTCTTAGGTATTTCAACAATGCAATCCTCGCCGCCGCCATTGAGAGAA
TSA: Capsicum annuum MA_MegaContig_34976, mRNA sequence.
JW160895.1:742-766
ATTCTAGGGTTTTGGAATTGAGCTGGTCGA742GCTTCGACTCTTAGGTATTTCAACAATGCAATCCTCGCCGCCGCCATTGAGAGAA
Capsicum annuum Takanotsume DNA, chromosome 5, sequence.
AP026700.1:4151166-4151190
ATTCTAGGGTTTTGGAATTGAGCTGATCGA4151166GCTTCGACTCTTAGGTATTTCAACAATGCAATCCTCGCCGCCGCCATTGAGAGAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 5.
CP124727.1:4742697-4742721
ATTCTAGGGTTTTGGAATTGAGCTGATCGA4742697GCTTCGACTCTTAGGTATTTCAACAATGCAATCCTCGCCGCCGCCATTGAGAGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tgttgaaatacctaagagtcgaagc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tgttgaaatacctaagagtcgaagc | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.187 | 0.178 | search_plus_done; http://172.18.8.135:50400/match?q=TGTTGAAATACCTAAGAGTCGAAGC&k=0&no_gap=0&offset=0&limit=50
0.253 | 0.066 | search_minus_done; http://172.18.8.135:50400/match?q=GCTTCGACTCTTAGGTATTTCAACA&k=0&no_gap=0&offset=0&limit=48
0.255 | 0.003 | cgi_end;

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