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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:41:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Ipomoea batatas Contig_4339.Ipbalsr mRNA sequence.
JP108927.1:1232-1255
GTGCAGAAGGTCTATTGAGTATTGCTGCTC1232TTGATTTCGCCCTTCCTTCAACTAAAACCTGCTCTTGAAGATAATCGTGTTGGG
Ipomoea nil cDNA clone:jmsf46d01, 5' end.
CJ755242.1:243-266
CCCAACACGATTATCTTCAAGACCAGGTTT243TAGTTGAAGGAAGGGCGAAATCAAGAGCAGCAATACTCAATAGACCTTCTGCAC
sp_d25_35 Sweetpotato cDNA library D Ipomoea batatas cDNA 5', mRNA sequence.
EE881232.1:299-322
CCCAACACGATTATCTTCAAGAACAGGTTT299TAGTTGAAGGAAGGGCGAAATCAAGAGCAGCAATACTCAATAGACCTTCTGCAC
Ipomoea trifida cultivar NCNSP0306 chromosome 15.
CP025658.1:21696091-21696114
AAATATATTTTTGGTTTTCATCATAGGTTT21696091TAGTTGAAGGAAGGGCGAAATCAAGAGCAGCAATACTCAATAGACCTTCTGCAC
Ipomoea triloba cultivar NCNSP0323 chromosome 15.
CP025674.1:26526627-26526650
AAAAATATTTTTGGTTTTCATCATAGGTTT26526627TAGTTGAAGGAAGGGCGAAATCAAGAGCAGCAATACTCAATAGACCTTCTGCAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ttgatttcgcccttccttcaacta
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ttgatttcgcccttccttcaacta | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.167 | 0.158 | search_plus_done; http://172.18.8.135:50400/match?q=TTGATTTCGCCCTTCCTTCAACTA&k=0&no_gap=0&offset=0&limit=50
0.312 | 0.145 | search_minus_done; http://172.18.8.135:50400/match?q=TAGTTGAAGGAAGGGCGAAATCAA&k=0&no_gap=0&offset=0&limit=49
0.315 | 0.003 | cgi_end;

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