# [ GGGenome | 2024-03-28 19:35:21 ] # database: Tasmanian devil genome, WTSI Devil_ref v7.0/sarHar1 (Feb, 2011) # query: TTCATTGACAACATT # count: 12 # query: AATGTTGTCAATGAA # count: 16 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins chr1_GL834636_random + 38418 38432 ACAAATAACTTCACCATTGTGTGAACTTAAACAAATCACTTGTTTGTCTTCATTTGTGGAAAGTTGAATAAAGTTTGACTAGATGACTTCTGAGGTCCATTTCATTGACAACATTCTATGTTCTATGTTCTTTCATTCTGAATTCTAAGGTACCTTCTGGCTCTAATATCCTAGAATTCCATGAAGAGGATATCACAGACTTCTCCTACACCTTC 38318 38532 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr1_GL834763_random + 705263 705277 AATATCATCCTTTATTTCTTAATCATGTACCCATTTTGATCTTATCTTGGTATAAAATGTGAGATGTTGTTCTATCTAGTTTCTGGACTGCTTTTCAGTTTTCATTGACAACATTTTCTTTTCTTTTCTTCTTTTTTTTTCTGAGGCAATTGGAGTTAAGTGACTTGCCCACGGTCACATAGCTAGGAAGCATTAAGTGTTTGAGTTCAGATTTA 705163 705377 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr1_GL835949_random + 43560 43574 TTACCTACAAACTTTATGTTAATTGCAAATTTGATAAATCTGTCATCTATGCCTTCATCCAAGACTAATAAAAATGTCAACAAACAAAAGCCATGTACTATTCATTGACAACATTACAGTATAGACTTCCTTCTTTCTATATAGTCATTAAATGACATGAAAAACAATTTATGAAAGATAATGCAGTGGGTAGAGCCAGACTTAGAGATTCAACT 43460 43674 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr2_GL841299_random + 2073583 2073597 GGCTTACTTCTGCTGGTAATAGATTTAGAGATAGGAGATATCTTAGAGATCATCTAGTTCAATTCAACTGGGAAAAACAAAGCAACTTTTCCTATGTCTCTTCATTGACAACATTGTTTACTATTAAAGAATAAACAAGATCAGGAATTCCAAGTATAACTTCCATAATAACTTAAGAAAAGTAAACCAAATAAAAATAACAGGTGTGGGAGGAC 2073483 2073697 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr2_GL841300_random + 1412916 1412930 TCAAAATGAGGCCCTTTTCTACCTTTCTAGTCTTCTTACATTTTACGCTCTTCCAAGTAACCATATGGCAACATTGGCCTTCTTGTTACTCTTCATGTTTTTCATTGACAACATTATATCTTCTGATTACCTGATCATATACCTGAAATGCTCTCCTTATTCGTCTCTGCCTCCTGGCTTCCTTCAAGTCCCCACTAACATCTCACCAAACACAA 1412816 1413030 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr2_GL841401_random + 723978 723992 TTTCATGTTTAGTGTTATAGGAACAAGTACACATCTGGATAAGATAACTGGTTTTTGTGATTGAACAGAAGTATTGTTATATAAAGTCTTCTTCTGTAGGTTCATTGACAACATTTTTGTAGCAAATCTAGCAGTAGAGAAAACAACAGGGATGACAGGAATCTTGTTCCTTAATGGTATAGACTTCTTCTACTAGTCCTCTATATTTTAAAAGT 723878 724092 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr3_GL849706_random + 139476 139490 CACAATAAACTTAAAGTTGTTAGAAAAAGAAGAAATTAAATATATCAAGGTTTAATGAGAAACAGTATGAAATAAGTTATTCCTCTATTATTCACTAATCTTCATTGACAACATTAATTTATTTCTTATATTAATATTCACTGTGGCGTGTAATTACTACAAAACAATCCATCCAGTGGTATTTGTTGGTATTTTCACACAGTGAAATTTTATCT 139376 139590 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr3_GL850557_random + 29032 29046 GGCTGGTTTTTGGAGAGGCAGAATATCTAGAGATAAAATTGCCAACATTTGTGGGGTTATTGAAAAAGCAAGGGAATTTCAGAAAACCATTTCCTTTTGCTTCATTGACAACATTTAAGCCTTTGAGTATGGATCACAATAAATTGTTCCAAGTCCTCAAAGGAATGGAAGTACCAGATTATCCCCCCCTTTCATCAAAAAGTGTTTACAATAGG 28932 29146 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr4_GL857006_random + 1127546 1127560 CCCGTTAGCCGGGCCCGCCCGCCCCAGGTCCCGCCTGACGCTCTCTCGTGTGTCTGCCCGCAGGTACACCTCCTCGGTGAAGTACGACTCAGAGAAGCACTTCATTGACAACATTTACATGCCGGTGGGGCTGGCGGTCTCCTCCTGCAGCCAGACCGTGGTCTGCATCCCTGGCTGCACCTGGCGGAACTACAAAGCCGAGCTGCGCTTCGAGC 1127446 1127660 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr4_GL857016_random + 476336 476350 GAAAAGAGTTTTGGGGCTGCCACCCCCTCCCAGCAAGAATCTGCTTGTCAATAAACCCAAAGAGTAGGATATGAGTCTGAGAGTCAGAGGGAGAAAGGCTTTCATTGACAACATTTATTCCTGGTATGACTTCAGGTGGGTCCCTTATGTTTTCTGAACTTCATATTCCTCCCAGTAAAACCTAAGTGCCCCCTCTAGTATCTGTGTACCTCAAT 476236 476450 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr4_GL857151_random + 25872 25886 GTGAATTGATATTCTCACAAACCCGACCTAAATCTTGTGCTTTAGGAGATCCCTTGTGCTCTCTACACAGGGTCTAAGCCCTGTTCTGAAGCAATAGTGATTCATTGACAACATTTTCAAGGCAAGTAAGTATTGCAGGGAATTAGCAATCAAGCCAACTTGGAATATCCCGTGAATTCTGATTCCTGATTCTCATACTCTGTTGGAGCTAGACT 25772 25986 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr5_GL861687_random + 977231 977245 ACCAGAAGACAGTAGTGTCCTGAAAACCTAAAGGGAAGAAGGTAGCAAGGAAAAAAGAAAGATGTTTCAAAAGCTACAGGGAAATGAAGAAGGCTGAAGATTCATTGACAACATTGGAAAGAGCAGTTTTAGTTGAATGTTAAGATTGAAATCCAGACTATAGAATTAAGGAGTGAGGGAAAAGGAAATGTAGGCACCTATTATTGATGGCCTTC 977131 977345 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 chr1_GL834618_random - 3488170 3488184 TGTATCAGAAGGGGAAGGTGGTCTCCCAGGTTCTGACTGTCTTGTGTACAAAGATAGAAGAGTAGCAAGAACACTACCAGGTTAGATGAATGGCAAGATAAATGTTGTCAATGAAAAAAAAAAATTGTAACTTTGCCCAGAGTCATGCCGGATTGGACAAAAATGTTATTTGGAAACCAAGCCCCACATTTCCCACTGACAGTGGCATAGACCGA 3488070 3488284 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr1_GL834650_random - 1269823 1269837 CTTTCTCAATGAATGGCCCACACCTGTCAAAGACCAGGAGCTTGTTTTCCCCTACCCCAGTGTCAGCACCAGGGGGTAGAGCCAGTCCAAAAGACTACTGAATGTTGTCAATGAATGAATGAATGAATGTATAGATGAATGAGTGAATGAATGAAAAGCTTTAATTAAACTATTACTTTGTATGAAGTACTGAGTTATAAACCCTGGGAACACTT 1269723 1269937 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr2_GL841150_random - 93717 93731 ATGACTTTTTAAAACTTGTAATAAGCTAGAAGTGTTATAACATATAACTTCTATTTAGGAATCAAAAGATGATCAGTGGAAGCGTGCTATGGATTATCTAAATGTTGTCAATGAACTCAATTACATGACTCAAATTGTTATCATGCTCTATGAGGATCCAAACAAGGTAACTTAATTTGATTATTTTATTCTGTATCTTTTCAAAAATAAATAAC 93617 93831 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr2_GL841316_random - 205344 205358 CTGCTCCCTCTGACCTCATTTACTTTCTTCTAGATACTCTATACAAGGGTTCTTAATTTGATTATACAGATTCCCAAAAGTTGTGTGGATAGATTTCAGGAATGTTGTCAATGAACTTAGATAGAAGAAAATATCTTGGAATTTCAGTTCAATTAAAACCTTGAATTTTAACTTTAACTGCATTTCTTTAATTAGGAATTTTAAAATTTCATTAA 205244 205458 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr2_GL841376_random - 2827382 2827396 CAATTTATATATGCAGTTCTATTCAGCCACCACCAGATGTTGCTATTGTAAATAATATGATTGCCCTTATCAGTTCTGTGATTGTTATGAAGCTATTAGAAATGTTGTCAATGAAATGTCAAATGCACCAGGAAATTATGTTCTCTCTCTCTCTAAGGGAAGGCCTTGGCAACCTCAGTGCTCAGTACACAAAATAAATAATGTCACTTCCTGCT 2827282 2827496 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr2_GL841434_random - 112092 112106 GTGATCCTGTACAAATCACTTAACCAGTTTGCTTCAGTTTCCTCATCTGTAAAATAAGGAAATGGCAAATCATTCCAATATCATTGCCAAGAAAACTCCAAATGTTGTCAATGAAGAGTTGGACATGATTGAAAATGACCAAGATCATCTAATCCCACCACTTTATTTGAAAAATGACAAGACTAAAATCCAAAATGGAGAATATAATGCCTGGT 111992 112206 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr2_GL841498_random - 852480 852494 CCTTGAAAGAGGTTAAAGATTCTAAAAGACAAAATGTAAGGAGACAGTAAATTCCAATCATGAGAATCAACCTGTGCAAAAGCAATGAGATGGGAAAGAAAATGTTGTCAATGAAGAGTAATAAGTAGGTAAATTTGGATAGAACATTAAATGTGGGAGGGGATGAAGGATTAAACCAGTTTGAAAAGATGGTTTAGAGTTGGATTGTGACGTGT 852380 852594 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr3_GL849653_random - 294962 294976 CAATTAAACTCCTAATGTCAGATTTATTTCATGAGATAGTCCTAATCTGTGTGTGCACATGATGTATATTTCTGTGTGCAATGGATTGCTTTGTAAGTCTAATGTTGTCAATGAACTATCAAAATCATGTTTTTAAGTTAATTAAAGAAAATGTAAAATTTCAGCTAGGGGCTAGTAAAAATAGACAGATAGATAGATAGATAAATAGATGGATG 294862 295076 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr3_GL849656_random - 592583 592597 CATAATACAGAATTCTTTTTCGTAGAAAAAAATTTAAAGTGAAATTGTGTTAATTTACTTTACTTCATTGACAACACTGGTGAAAAGGAAGATTTTCACCAATGTTGTCAATGAAGTAAAGTAAATTAATCTTCCTTTATGGAACAAGAAATCATAGTCTAGGTACCAATATTTCCTGTTGGCTGCTTGCTCAAACTAAAATCATAAATACTTAA 592483 592697 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr3_GL849686_random - 264881 264895 TAAATGGTTGTTGAGAAAGTATAGGAAAAGACAGCTTAAGCTATTCTACCCAAATGTTTTTCATAGAAAGAGAGAAAAATGATAGGAATAGCTTGGGAGAAATGTTGTCAATGAAAAAAGATTTTTATGTTTTTAAGATAGAAGATACCTGAGCTTGTTTGTAGGTAATGTCAGGGAGGCAGGAAAGTTAAGTGATAGGAACATAATGGCATAAT 264781 264995 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr3_GL849801_random - 111799 111813 TGTGTCAGATACTGAAATTATAGAGAGAAATTAAGATCTTTATTCTCATGAAGCAGAACAGACAACTATATTAAAGTTAACAAAAAGATGAAATATAGACAATGTTGTCAATGAATGATTATAGCAAAAGCATACATTTTTTTTTAAAGCATATAGTCTTCCTTTTTGCCACGGTCATTTTATTAGACCATTTTACTTAATTATTTATGGAGTTA 111699 111913 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr3_GL849876_random - 1006502 1006516 TCAAAAATCAATTTTATATTTCTAGGATACCAAAGTTATAATAATACATTGCCTAACAAAATTAAAATGTTCACTTACATATAAGATTAGGGAAATTCCAAATGTTGTCAATGAACTATCTTCTCAGGCTAAATACAAACATATCTGAACTATATGTTTTTAACAAGTCTCCTTCCAATGATTACAAGAAAAAAAAAAAAGAAATTGCTGCTAGA 1006402 1006616 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr4_GL857875_random - 9332 9346 AGAGTCTAGCTCCAACAGAGTAAGGAGAATCAGGGAATCAGAATTCACAGGATATTCCAAGTTGGCTTGATTGCTAATTCCCTGCAATGCTTACCTTGAAAATGTTGTCAATGAATCACTATTGCTTCAGTACAGGGCTTAGACCCTGTGTAGAGAACACAAAGGATCTCCTAAAGCACAAGATTTAGGTCGGGTTTGTGAGAATATCAATTCAC 9232 9446 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr5_GL861556_random - 561362 561376 CGAGTTCATCACCTTTGTGTCAGAGAGTAGATAGCATGTTTCATCATTAGTCTTTTAGAATCCTGGGTTAATCATTACATTCATCATTTGTTTGTTTTTAAATGTTGTCAATGAATAAATTGTTCTCCTGGTTTTGCTTACTTTACTCTGTATTAGTTCATATACATCTTCCCCAACTTCTTCCCTTAGAGAGATATTAGGGTAGCATATGCCAG 561262 561476 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr5_GL861594_random - 1012478 1012492 TAGAATAGTACCAGTATGGAGGGATGGGGGTAACTGGAAACACAAATGAATACGTTAAAAATGGTCAGTTCAAGACTCTGTTTATTCAAATAACTAACATAATGTTGTCAATGAAGTCTTCCTTATAAGATCAGAAATTGAAAGCTGGAAAGGACCTTACATCTACTTATTAGAGAACACTATTATTAGTTCAGGAAGGGGAAAGGAAATAAGCA 1012378 1012592 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 chr6_GL864840_random - 257915 257929 TAAGGTATATTTGTAAAGTGCTCCTATTTTATAATATTGTTGTAATAAAAATCTTGTATATATTGTTCTATTTAAATGTGACTTCTTAAAATTACTATAAAATGTTGTCAATGAATATTCTTCATTAAGTATTTGTATGCATATATATACACAGCTGAATGCATGAATAAACATAATGATATGATTTTTTAAATACATCTGCAAATAATTGGTAT 257815 258029 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0