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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:22:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

UCRPT01_0005O03_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0005O03, mRNA sequence.
CV704760.1:36-55
ATAAAAATATCGAACACGAGTCGCACACAG36CACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCG
IC0AAA11AF07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY263223.1:35-54
ATAAAAATATCGAACACGAGTCGCACACAG35CACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCT
IC0AAA16BH04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY265135.1:47-66
ATAAAAATATCGAACACGAGTCGCACACAG47CACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCT
IC0AAA29BB06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY270267.1:35-54
ATAAAAATATCGAACACGAGTCGCACACAG35CACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCT
IC0AAA55AC07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY281841.1:44-63
ATAAAAATATCGAACACGAGTCGCACACAG44CACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCT
IC0AAA73CC06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY289781.1:28-47
AAAATATCGAACACGAGTCGCACACAG28CACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCT
IC0AAA93BC01RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY297637.1:141-160
ATAAAAATATCGAACACGAGTCGCACACAG141CACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCT
CR05-C3-700-144-G11-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY792629.1:46-65
TAAAAATATTTTAACACGAGTCGCACACAG46CACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCT
IC0AAA55AC07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA55AC07, mRNA sequence.
FC878215.1:44-63
ATAAAAATATCGAACACGAGTCGCACACAG44CACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCT
IC0AAA93BC01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA93BC01, mRNA sequence.
FC887243.1:141-160
ATAAAAATATCGAACACGAGTCGCACACAG141CACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCT
IC0AAA73CC06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73CC06, mRNA sequence.
FC887611.1:28-47
AAAATATCGAACACGAGTCGCACACAG28CACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCT
IC0AAA11AF07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA11AF07, mRNA sequence.
FC893464.1:35-54
ATAAAAATATCGAACACGAGTCGCACACAG35CACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCT
IC0AAA66CH02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA66CH02, mRNA sequence.
FC899335.1:44-63
ATAAAAATATCGAACACGAGTCGCACACAG44CACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCT
IC0AAA16BH04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA16BH04, mRNA sequence.
FC899961.1:47-66
ATAAAAATATCGAACACGAGTCGCACACAG47CACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCT
IC0AAA29BB06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA29BB06, mRNA sequence.
FC911580.1:35-54
ATAAAAATATCGAACACGAGTCGCACACAG35CACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCT
C32107F02EF RVDevelopN Citrus clementina cDNA clone C32107F02, mRNA sequence.
FC921636.1:13-32
GGTCGCACACAG13CACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCG
Citrus sinensis genome assembly, chromosome: 9.
OY754326.1:4164505-4164524
AGAGAGAGAGAGAGAGAGGATGTTTGGTTA4164505GGGAGAAAGTCAAGAGCGTGCTGTGTGCGACTCGTGTTCGATATTTTTAT
Allacma fusca genome assembly, chromosome: 2.
OX359246.1:17492411-17492430
AAATGCATCTCAGAATTCTCTCCAGGAATT17492411GGGAGAAAGTCAAGAGCGTGAAAATACATAGAGGAGTCAAAAGGGAAGGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACGCTCTTGACTTTCTCCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACGCTCTTGACTTTCTCCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.384 | 1.376 | search_plus_done; http://172.18.8.135:50400/match?q=CACGCTCTTGACTTTCTCCC&k=0&no_gap=0&offset=0&limit=50
1.448 | 0.064 | search_minus_done; http://172.18.8.135:50400/match?q=GGGAGAAAGTCAAGAGCGTG&k=0&no_gap=0&offset=0&limit=34
1.450 | 0.002 | cgi_end;

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