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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:44:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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UCRCS01_02ag06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ag06, mRNA sequence.
CB290985.1:138-158
CGTTTAAGCCTTACTGGGATATATTCTTGA138CGGGCGTAAGAGGGATTTTGCATATGCCATTGGGAGGGCAGCTATCTTCTT
FLAVEDO0002_IIIaR_H04 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIIaR_H04 3', mRNA sequence.
CB304717.1:244-264
AGTTTAAGCCTTACTGGTATATATTCTTGA244CGGGCGTAAGAGGGATTTTGCATATGCAATTGGTAGTGCAGCTATCTTCTT
FLAVEDO0003_IVaR_C09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_C09 3', mRNA sequence.
CB305043.1:146-166
AGTTTAAGCCTTACTGGTATATATTCTTGA146CGGGCGTAAGAGGGATTTTGCATATGCAATTGGTAGTGCAGCTATCTTCTT
UCRCS04_0005F10_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005F10, mRNA sequence.
CN184332.1:189-209
AGTTTAAGCCTTACTGGTATATATTCTTGA189CGGGCGTAAGAGGGATTTTGCATATGCAATTGGTAGTGCAGCTATCTTCTT
CP-17_D06_047.f1 Citrus paradisi young grapefruit leaf cDNA library Citrus x paradisi cDNA clone CP-17_D06_047 3', mRNA sequence.
EB684762.1:183-203
AGTTTAAGCCTTACTGGTATATATTCTTGA183CGGGCGTAAGAGGGATTTTGCATATGCAATTGGTAGTGCAGCTATCTTCTT
JP 2022104707-A/1: Determining methods of carotenoid content in citrus fruits.
PA551512.1:4837-4857
AAGAAGATAGCTGCACTACCAATTGCATAT4837GCAAAATCCCTCTTACGCCCGTCGAGAATATATACCAGTAAGGCTTAAACT
UCRCS01_02ag06_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ag06, mRNA sequence.
CB290986.1:407-427
AAGAAGATAGCTGCACTACCAATTGCATAT407GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAAACT
UCRCS04_0005F10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005F10, mRNA sequence.
CN184333.1:206-226
AAGAAGATAGCTGCACTACCAATTGCATAT206GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAAACT
C02008D02SK IF1 Citrus clementina cDNA clone C02008D02, mRNA sequence.
CX289036.1:78-98
AAGAAGATAGCTGCACTACCAATTGCATAT78GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAAACT
Citrus nobilis x Citrus kinokuni mRNA, clone: EGJ_0280, 5'-end sequence, expressed in ovule.
DC886676.1:29-49
GAAGATAGCTGCACTACCAATTGCATAT29GCAAAATCCCTCTTACGCCCGTCGAGAATATATACCAGTAAGGCTTAAACT
Citrus limon mRNA, clone: LLL0487, 5'-end sequence, expressed in leaf.
DC891755.1:208-228
AAGAAGATAGCTGCACTACCAATTGCATAT208GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAAACT
Citrus unshiu mRNA, clone: STG0097, 5'-end sequence, expressed in style.
DC898135.1:81-101
AAGAAGATAGCTGCACTACCAATTGCATAT81GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAAACT
KN0AAK2AF06FM1 AbsCFruit Citrus sinensis cDNA 5', mRNA sequence.
DY257357.1:790-810
AAGAAGATAGCTGCACTACCCATTGCATAT790GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGGCTTAAAC
KN0AAK1AH09FM2 AbsCFruit Citrus sinensis cDNA 5', mRNA sequence.
EH406409.1:228-248
AAGAAGATAGCTGCACTACCAATTGCATAT228GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAAACT
CS12-C1-001-020-H03-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
EY754846.1:541-561
AAGAAGATAGCTGCACTACCAATTGCATAT541GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAAACT
CR05-C1-100-087-H02-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY765656.1:462-482
AAGAAGATAGCTGCACTACCAATTGCATAT462GCAAAATCCCTCTTACGCCCGTCGAGAATATATACCAGTAAGGCTTAAACT
CR05-C3-702-084-B07-CT.F Mandarin fruit, development stadium (3 of 3) Citrus reticulata cDNA, mRNA sequence.
EY807490.1:444-464
AAGAAGATAGCTGCACTACCAATTGCATAT444GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAAACT
CA26-C1-002-090-D10-CT.F Sour orange leaf, field plant Citrus aurantium cDNA, mRNA sequence.
EY849673.1:340-360
AAGAAGATAGCTGCACTACCAATTGCATAT340GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAAACT
CG32-C1-003-048-D11-CT.F Mexican lime leaf, greenhouse plant Citrus aurantiifolia cDNA, mRNA sequence.
EY854447.1:644-664
AAGAAGATACCTGCACTACCAATTGCATAT644GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAAGGCTTAAAC
KN0AAK1AH09FM2 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK1AH09, mRNA sequence.
FC871526.1:228-248
AAGAAGATAGCTGCACTACCAATTGCATAT228GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAAACT
C31708G06EF StrClemenN Citrus clementina cDNA clone C31708G06, mRNA sequence.
FC923772.1:538-558
AAGAAGATAGCTGCACTACCAATTGCATAT538GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAAACT
514 'Cara cara' navel orange fruit cDNA library Citrus sinensis cDNA clone 651 5', mRNA sequence.
GO241866.1:365-385
AAGAAGATAGCTGCACTACCAATTGCATAT365GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAAACT
Citrus unshiu mRNA for phytoene synthase, complete cds.
AB037975.1:1442-1462
AAGAAGATAGCTGCACTACCAATTGCATAT1442GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAAACT
Citrus x paradisi phytoene synthase mRNA, complete cds.
AF152892.2:1514-1534
AAGAAGATAGCTGCACTACCAATTGCATAT1514GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAAACT
Citrus unshiu phytoene synthase (Psy1) mRNA, complete cds.
AF220218.1:1375-1395
AAGAAGATAGCTGCACTACCAATTGCATAT1375GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAAACT
Citrus sinensis phytoene synthase mRNA, complete cds.
DQ235260.1:1264-1284
AAGAAGATAGCTGCACTACCAATTGCATAT1264GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAA
X Citrofortunella mitis phytoene synthase mRNA, complete cds.
EU375851.1:1264-1284
AAGAAGATAGCTGCACTACCAATTGCATAT1264GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAA
Citrus maxima phytoene synthase mRNA, complete cds.
EU375852.1:1267-1287
AAGAAGATAGCTGCACTACCAATTGCATAT1267GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAA
Citrus maxima PSY mRNA, complete cds.
KP462726.1:1270-1290
AAGAAGATAGCTGCACTACCAATTGCATAT1270GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAA
Citrus sinensis genome assembly, chromosome: 9.
OY754326.1:4027433-4027453
AAGAAGATAGCTGCACTACCAATTGCATAT4027433GCAAAATCCCTCTTACGCCCGTCAAGAATATATACCAGTAAGGCTTAAACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGGGCGTAAGAGGGATTTTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGGGCGTAAGAGGGATTTTGC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.309 | 0.300 | search_plus_done; http://172.18.8.135:50400/match?q=CGGGCGTAAGAGGGATTTTGC&k=0&no_gap=0&offset=0&limit=50
1.629 | 1.320 | search_minus_done; http://172.18.8.135:50400/match?q=GCAAAATCCCTCTTACGCCCG&k=0&no_gap=0&offset=0&limit=45
1.645 | 0.016 | cgi_end;

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